KEGG   Homo sapiens (human): 7158
Entry
7158              CDS       T01001                                 
Symbol
TP53BP1, 53BP1, TDRD30, p202, p53BP1
Name
(RefSeq) tumor protein p53 binding protein 1
  KO
K20915  tumor suppressor p53-binding protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04621  NOD-like receptor signaling pathway
Network
nt06506  Double-strand break repair
  Element
N01445  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    7158 (TP53BP1)
SSDB
Motif
Pfam: 53-BP1_Tudor BRCT_3 BRCT_2 BRCT Tudor_5 RTT107_BRCT_5 DUF4537 SH3_Hsr9 Tudor_2
Other DBs
NCBI-GeneID: 7158
NCBI-ProteinID: NP_005648
OMIM: 605230
HGNC: 11999
Ensembl: ENSG00000067369
UniProt: Q12888
Structure
LinkDB
Position
15:complement(43403061..43510640)
AA seq 1972 aa
MDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKENPVLD
VVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPNRTSSV
LGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLELSQSQD
VEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKDIPVTA
QPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSPEPEVL
STQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSLSTNSS
DLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPVELENP
PLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGKKDGDM
HSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHRIDEDG
ENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRDDISIL
ATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHPEEGSS
GSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEAMEVET
SVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPLEGVEK
CSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSLPLVRA
DDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSFCESSS
ETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDVMSESM
VETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGERKNGST
AVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKEKLEGD
HTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTNKENPS
KALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDATVQTER
GSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVITDVYYV
DGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRTSSGTS
LSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVCEEDGD
AGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKSFSRVV
PRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKWSSNGY
FYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSAGVVKG
HRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAADISLD
NLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEEERSPA
KRGRKSATVKPGAVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFLLTMAT
TSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAY
QCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRIL
DWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVV
VTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
NT seq 5919 nt   +upstreamnt  +downstreamnt
atggaccctactggaagtcagttggattcagatttctctcagcaagatactccttgcctg
ataattgaagattctcagcctgaaagccaggttctagaggatgattctggttctcacttc
agtatgctatctcgacaccttcctaatctccagacgcacaaagaaaatcctgtgttggat
gttgtgtccaatcctgaacaaacagctggagaagaacgaggagacggtaatagtgggttc
aatgaacatttgaaagaaaacaaggttgcagaccctgtggattcttctaacttggacaca
tgtggttccatcagtcaggtcattgagcagttacctcagccaaacaggacaagcagtgtt
ctgggaatgtcagtggaatctgctcctgctgtggaggaagagaagggagaagagttggaa
cagaaggagaaagagaaggaagaagatacttcaggcaatactacacattcccttggtgct
gaagatactgcctcatcacagttgggttttggggttctggaactctcccagagccaggat
gttgaggaaaatactgtgccatatgaagtggacaaagagcagctacaatcagtaaccacc
aactctggttataccaggctgtctgatgtggatgctaatactgcaattaagcatgaagaa
cagtccaacgaagatatccccatagcagaacagtccagcaaggacatccctgtgacagca
cagcccagtaaggatgtacatgttgtaaaagagcaaaatccaccacctgcaaggtcagag
gacatgccttttagccccaaagcatctgttgctgctatggaagcaaaagaacagttgtct
gcacaagaacttatggaaagtggactgcagattcagaagtcaccagagcctgaggttttg
tcaactcaggaagacttgtttgaccagagcaataaaacagtatcttctgatggttgctct
actccttcaagggaggaaggtgggtgttctttggcttccactcctgccaccactctgcat
ctcctgcagctctctggtcagaggtcccttgttcaggacagtctttccacgaattcttca
gatcttgttgctccttctcctgatgctttccgatctactccttttatcgttcctagcagt
cccacagagcaagaagggagacaagataagccaatggacacgtcagtgttatctgaagaa
ggaggagagccttttcagaagaaacttcaaagtggtgaaccagtggagttagaaaacccc
cctctcctgcctgagtccactgtatcaccacaagcctcaacaccaatatctcagagcaca
ccagtcttccctcctgggtcacttcctatcccatcccagcctcagttttctcatgacatt
tttattccttccccaagtctggaagaacaatcaaatgatgggaagaaagatggagatatg
catagttcatctttgacagttgagtgttctaaaacttcagagattgaaccaaagaattcc
cctgaggatcttgggctatctttgacaggggattcttgcaagttgatgctttctacaagt
gaatatagtcagtccccaaagatggagagcttgagttctcacagaattgatgaagatgga
gaaaacacacagattgaggatacggaacccatgtctccagttctcaattctaaatttgtt
cctgctgaaaatgatagtatcctgatgaatccagcacaggatggtgaagtacaactgagt
cagaatgatgacaaaacaaagggagatgatacagacaccagggatgacattagtatttta
gccactggttgcaagggcagagaagaaacggtagcagaagatgtttgtattgatctcact
tgtgattcggggagtcaggcagttccgtcaccagctactcgatctgaggcactttctagt
gtgttagatcaggaggaagctatggaaattaaagaacaccatccagaggaggggtcttca
gggtctgaggtggaagaaatccctgagacaccttgtgaaagtcaaggagaggaactcaaa
gaagaaaatatggagagtgttccgttgcacctttctctgactgaaactcagtcccaaggg
ttgtgtcttcaaaaggaaatgccaaaaaaagaatgctcagaagctatggaagttgaaacc
agtgtgattagtattgattcccctcaaaagttggcaatacttgaccaagaattggaacat
aaggaacaggaagcttgggaagaagctacttcagaggactccagtgttgtcattgtagat
gtgaaagagccatctcccagagttgatgtttcttgtgaacctttggagggagtggagaag
tgctcagattcccagtcatgggaggatattgctccagaaatagaaccatgtgctgagaat
agattagacaccaaggaagaaaagagtgtagaatatgaaggagatctgaaatcagggact
gcagaaacagaacctgtagagcaagattcttcacagccttccttacctttagtgagagca
gatgatcctttaagacttgaccaggagttgcagcagccccaaactcaggagaaaacaagt
aattcattaacagaagactcaaaaatggctaatgcaaagcagctaagctcagatgcagag
gcccagaagctggggaagccctctgcccatgcctcacaaagcttctgtgaaagttctagt
gaaaccccatttcatttcactttgcctaaagaaggtgatatcatcccaccattgactggt
gcaaccccacctcttattgggcacctaaaattggagcccaagagacacagtactcctatt
ggtattagcaactatccagaaagcaccatagcaaccagtgatgtcatgtctgaaagcatg
gtggagacccatgatcccatacttgggagtggaaaaggggattctggggctgccccagac
gtggatgataaattatgtctaagaatgaaactggttagtcctgagactgaggcgagtgaa
gagtctttgcagttcaacctggaaaagcctgcaactggtgaaagaaaaaatggatctact
gctgttgctgagtctgttgccagtccccagaagaccatgtctgtgttgagctgtatctgt
gaagccaggcaagagaatgaggctcgaagtgaggatccccccaccacacccatcaggggg
aacttgctccactttccaagttctcaaggagaagaggagaaagaaaaattggagggtgac
catacaatcaggcagagtcaacagcctatgaagcccattagtcctgtcaaggaccctgtt
tctcctgcttcccagaagatggtcatacaagggccatccagtcctcaaggagaggcaatg
gtgacagatgtgctagaagaccagaaagaaggacggagtactaataaggaaaatcctagt
aaggccttgattgaaaggcccagccaaaataacataggaatccaaaccatggagtgttcc
ttgagggtcccagaaactgtttcagcagcaacccagactataaagaatgtgtgtgagcag
gggaccagtacagtggaccagaactttggaaagcaagatgccacagttcagactgagagg
gggagtggtgagaaaccagtcagtgctcctggggatgatacagagtcgctccatagccag
ggagaagaagagtttgatatgcctcagcctccacatggccatgtcttacatcgtcacatg
agaacaatccgggaagtacgcacacttgtcactcgtgtcattacagatgtgtattatgtg
gatggaacagaagtagaaagaaaagtaactgaggagactgaagagccaattgtagagtgt
caggagtgtgaaactgaagtttccccttcacagactgggggctcctcaggtgacctgggg
gatatcagctccttctcctccaaggcatccagcttacaccgcacatcaagtgggacaagt
ctctcagctatgcacagcagtggaagctcagggaaaggagccggaccactcagagggaaa
accagcgggacagaacccgcagattttgccttacccagctcccgaggaggcccaggaaaa
ctgagtcctagaaaaggggtcagtcagacagggacgccagtgtgtgaggaggatggtgat
gcaggccttggcatcagacagggagggaaggctccagtcacgcctcgtgggcgtgggcga
aggggccgcccaccttctcggaccactggaaccagagaaacagctgtgcctggccccttg
ggcatagaggacatttcacctaacttgtcaccagatgataaatccttcagccgtgtcgtg
ccccgagtgccagactccaccagacgaacagatgtgggtgctggtgctttgcgtcgtagt
gactctccagaaattcctttccaggctgctgctggcccttctgatggcttagatgcctcc
tctccaggaaatagctttgtagggctccgtgttgtagccaagtggtcatccaatggctac
ttttactctgggaaaatcacacgagatgtcggagctgggaagtataaattgctctttgat
gatgggtacgaatgtgatgtgttgggcaaagacattctgttatgtgaccccatcccgctg
gacactgaagtgacggccctctcggaggatgagtatttcagtgcaggagtggtgaaagga
cataggaaggagtctggggaactgtactacagcattgaaaaagaaggccaaagaaagtgg
tataagcgaatggctgtcatcctgtccttggagcaaggaaacagactgagagagcagtat
gggcttggcccctatgaagcagtaacacctcttacaaaggcagcagatatcagcttagac
aatttggtggaagggaagcggaaacggcgcagtaacgtcagctccccagccacccctact
gcctccagtagcagcagcacaacccctacccgaaagatcacagaaagtcctcgtgcctcc
atgggagttctctcaggcaaaagaaaacttatcacttctgaagaggaacggtcccctgcc
aagcgaggtcgcaagtctgccacagtaaaacctggtgcagtaggggcaggagagtttgtg
agcccctgtgagagtggagacaacaccggtgaaccctctgccctggaagagcagagaggg
cctttgcctctcaacaagaccttgtttctgggctacgcatttctccttaccatggccaca
accagtgacaagttggccagccgctccaaactgccagatggtcctacaggaagcagtgaa
gaagaggaggaatttttggaaattcctcctttcaacaagcagtatacagaatcccagctt
cgagcaggagctggctatatccttgaagatttcaatgaagcccagtgtaacacagcttac
cagtgtcttctaattgcggatcagcattgtcgaacccggaagtacttcctgtgccttgcc
agtgggattccttgtgtgtctcatgtctgggtccatgatagttgccatgccaaccagctc
cagaactaccgtaattatctgttgccagctgggtacagccttgaggagcaaagaattctg
gactggcaaccccgtgaaaatcctttccagaatctgaaggtactcttggtatcagaccaa
cagcagaacttcctggagctctggtctgagatcctcatgactggtggtgcagcctctgtg
aagcagcaccattcaagtgcccataacaaagatattgctttaggggtatttgatgtggtg
gtgacggacccctcatgcccagcctcggtgctgaagtgtgctgaagcattgcagctgcct
gtggtgtcacaagagtgggtgatccagtgcctcattgttggggagagaattggattcaag
cagcatccaaaatataaacacgattatgtttctcactaa

KEGG   Homo sapiens (human): 55183
Entry
55183             CDS       T01001                                 
Symbol
RIF1
Name
(RefSeq) replication timing regulatory factor 1
  KO
K11138  telomere-associated protein RIF1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
Network
nt06506  Double-strand break repair
  Element
N01445  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    55183 (RIF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsa03032]
    55183 (RIF1)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    55183 (RIF1)
SSDB
Motif
Pfam: Rif1_N NICE-1
Other DBs
NCBI-GeneID: 55183
NCBI-ProteinID: NP_060621
OMIM: 608952
HGNC: 23207
Ensembl: ENSG00000080345
UniProt: Q5UIP0
LinkDB
Position
2:151409902..151534435
AA seq 2472 aa
MTARGQSPLAPLLETLEDPSASHGGQTDAYLTLTSRMTGEEGKEVITEIEKKLPRLYKVL
KTHISSQNSELSSAALQALGFCLYNPKITSELSEANALELLSKLNDTIKNSDKNVRTRAL
WVISKQTFPSEVVGKMVSSIIDSLEILFNKGETHSAVVDFEALNVIVRLIEQAPIQMGEE
AVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKL
FMSKNETYVLKLWPLFVKLLGRTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGNSCHVATSPGLNPMTPVHKGASSPYGAPGTPRMNLSSNLGG
MATIPSIQLLGLEMLLHFLLGPEALSFAKQNKLVLSLEPLEHPLISSPSFFSKHANTLIT
AVHDSFVAVGKDAPDVVVSAIWKELISLVKSVTESGNKKEKPGSEVLTLLLKSLESIVKS
EVFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNFLECGVSD
ERFFLSLESLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPVNHIFSEQRFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSSLEDEGFSNLLFVDRIIYIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHTLSFKEAHSDTLFTIGNSITGIISS
VLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCLNNKLEKLLGEIIACLQFSY
TGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVMMLVYPEELKPVLTQAKQ
KFLLLLPGLETVEMMEESSGPYSDGTENSQLNVKISGMERKSNGKRDSFLAQTKNKKENM
KPAAKLKLESSSLKVKGEILLEEEKSTDFVFIPPEGKDAKERILTDHQKEVLKTKRCDIP
AMYNNLDVSQDTLFTQYSQEEPMEIPTLTRKPKEDSKMMITEEQMDSDIVIPQDVTEDCG
MAEHLEKSSLSNNECGSLDKTSPEMSNSNNDERKKALISSRKTSTECASSTENSFVVSSS
SVSNTTVAGTPPYPTSRRQTFITLEKFDGSENRPFSPSPLNNISSTVTVKNNQETMIKTD
FLPKAKQREGTFSKSDSEKIVNGTKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESVEG
IVVLENNPPGLLNQTECVSDNQVHLSESTMEHDNTKLKAATVENAVLLETNTVEEKNVEI
NLESKENTPPVVISADQMVNEDSQVQITPNQKTLRRSSRRRSEVVESTTESQDKENSHQK
KERRKEEEKPLQKSPLHIKDDVLPKQKLIAEQTLQENLIEKGSNLHEKTLGETSANAETE
QNKKKADPENIKSEGDGTQDIVDKSSEKLVRGRTRYQTRRASQGLLSSIENSESDSSEAK
EEGSRKKRSGKWKNKSNESVDIQDQEEKVVKQECIKAENQSHDYKATSEEDVSIKSPICE
KQDESNTVICQDSTVTSDLLQVPDDLPNVCEEKNETSKYAEYSFTSLPVPESNLRTRNAI
KRLHKRDSFDNCSLGESSKIGISDISSLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQ
PQEKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQANPYSEGQFLDEHHSVNFHLGL
KEDNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSSEAMSLESQESPNENFK
TVGPCLGDSKNVSQESLETKEEKPEETPKMELSLENVTVEGNACKVTESNLEKAKTMELN
VGNEASFHGQERTKTGISEEAAIEENKRNDDSEADTAKLNAKEVATEEFNSDISLSDNTT
PVKLNAQTEISEQTAAGELDGGNDVSDLHSSEETNTKMKNNEEMMIGEAMAETGHDGETE
NEGITTKTSKPDEAETNMLTAEMDNFVCDTVEMSTEEGIIDANKTETNTEYSKSEEKLDN
NQMVMESDILQEDHHTSQKVEEPSQCLASGTAISELIIEDNNASPQKLRELDPSLVSAND
SPSGMQTRCVWSPLASPSTSILKRGLKRSQEDEISSPVNKVRRVSFADPIYQAGLADDID
RRCSIVRSHSSNSSPIGKSVKTSPTTQSKHNTTSAKGFLSPGSRSPKFKSSKKCLISEMA
KESIPCPTESVYPPLVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASE
IKTLPIRSPKVSNVKKALRIYHEQQVKTRGLEEIPVFDISEKTVNGIENKSLSPDEERLV
SDIIDPVALEIPLSKNLLAQISALALQLDSEDLHNYSGSQLFEMHEKLSCMANSVIKNLQ
SRWRSPSHENSI
NT seq 7419 nt   +upstreamnt  +downstreamnt
atgacggccaggggtcagagccccctcgcgccgctgttggagactttggaagacccttct
gcctcccatggagggcagactgacgcttacctgactctgaccagtcgtatgactggagaa
gaaggaaaagaagtaattacagaaattgagaaaaaacttcctcggctgtacaaagtttta
aagactcacatttccagtcaaaactcggagctgagtagtgctgctctacaagccctgggg
ttttgcttatataatcccaaaattacctcagaattatcagaggcaaatgctctagaattg
ctttcaaaattgaatgataccattaagaattcagacaaaaatgtacgtactagagcactt
tgggtgatatctaagcagacatttccctctgaagtggttggcaaaatggtatccagtata
attgattcattagaaatactgtttaacaaaggagagacgcattctgctgttgttgatttt
gaagcattaaatgttatcgtaaggctaattgaacaagccccaattcaaatgggagaagag
gcagtgaggtgggcaaaactggtcatacctttagtggttcattcagcacaaaaggtacat
ttgcggggagcaactgctctggagatgggaatgccattattgcttcagaaacagcaagaa
atagcatctattacggagcagcttatgactactaaattaatctcagaacttcagaagcta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttgtttgtcaaactactt
ggaaggaccttgcatcgaagtgggagtttcatcaattctctcttgcaactagaagaactt
ggatttcgtagtggagcacccatgattaaaaagatagcttttattgcttggaagagttta
atagataattttgctttaaatccagatatactatgtagtgcaaaaagactcaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcattaacaaaactagaa
gtctggtggtatttactgatgagacttggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcaaagtacaataagcattgattctaatgcctcacctcagggcaat
tcgtgtcatgtagctacatctccaggtttaaatcctatgactcctgtacacaaaggtgct
tcctccccgtacggagccccgggaactccccgaatgaacctgagttcgaatttaggtgga
atggccacaatcccatccattcaacttttgggacttgaaatgttgcttcatttcttgttg
ggtccagaagccttgagttttgctaagcaaaataaacttgtgctgagcttagagccattg
gaacatccgttaatcagcagcccttcctttttttccaaacatgcaaatacacttatcact
gctgttcatgatagctttgttgcagttggaaaagatgcccccgatgtggttgtcagtgct
atctggaaggagctaattagcttggtgaagtcagttactgaatcaggtaacaaaaaagag
aaaccaggttctgaagttttgactctcttattaaagtctttggaaagcatagtaaagtct
gaagtatttcctgtatcaaaaacgctggtcctcatggaaattacaattaaaggacttcct
cagaaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaact
ccagctttgttcttaattcaattaattttcaacaatttcttggaatgtggtgtatcagat
gaaaggttctttctcagtttggaatcacttgtaggctgtgttctttctggtccaacttca
ccactagctttcagtgactcagttttaaatgttattaatcaaaatgcaaagcagttggaa
aataaggagcatctctggaaaatgtggagtgttatagtcaccccattaactgaattgatt
aatcagaccaatgaagtaaatcaaggtgatgccttagaacataattttagtgccatctat
ggtgcattgactttaccagtaaaccacattttttcagaacagagatttccagtggccacc
atgaagactttgcttagaacttggtcagaattatatagagcatttgctcgttgtgctgct
ttggtggcaacagcagaagagaacttgtgctgtgaggaactttcttccaagataatgtcc
agtttggaagatgaaggcttttctaatttgttgttcgtggatagaattatttatattatt
actgtaatggttgattgcattgacttctcaccatataatattaaatatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaatgagcccctagggaaattg
acttctttatttaaacttattgtgaaagtgatctattctttccacacactgagcttcaag
gaagcacattctgataccctcttcactattggcaactcaatcaccggcattatttccagt
gtacttgggcatatttctttgccttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaactcaaagcttgatgaagttcctaaagtatatagttgt
ctgaacaacaagttagaaaagctactgggagaaattattgcttgtctgcaattcagctac
accggaacttatgatagtgaacttcttgaacaactctccccactattatgcataatattt
ctgcacaagaataaacagattcgaaaacagagtgctcagttctggaatgccacttttgcc
aaagtgatgatgttggtttatcctgaagagttaaaaccagtactaacacaagccaaacaa
aaatttctgctcctgttgcctggtttggaaactgttgaaatgatggaggaatccagtgga
ccatattctgatggaacagaaaattcacaactaaatgtgaagataagtggcatggagaga
aaatcaaatggaaaaagagattcatttttggcacaaacaaagaataaaaaagaaaatatg
aaaccagcagccaaactgaaacttgaatcttcgtctttaaaagtaaagggtgaaattctt
ttggaagaggaaaagtctactgactttgtgtttatacctccagaaggaaaagatgcaaag
gaaagaatattaactgatcatcaaaaagaagttctcaaaacaaagcggtgtgatattcct
gccatgtataataatctggatgtttcccaagataccttatttactcagtatagtcaggaa
gagcctatggaaattcctactttaaccagaaaaccaaaggaggattctaagatgatgatt
acggaggagcaaatggacagtgacattgtcattcctcaagatgtcacggaagactgtggt
atggctgaacatcttgaaaagtcctccctttcgaataatgagtgtggttctcttgacaaa
accagtccagaaatgtcaaacagtaataatgatgaaagaaaaaaagctttaatttcatca
aggaaaacatcaactgaatgtgcatctagtacagaaaattctttcgttgtcagcagtagt
tcagtttctaataccactgttgctggaactcccccataccctacaagtcggaggcaaacc
tttattactttggagaagtttgatggttcagaaaatagaccttttagtccatcccccttg
aataatatttcatcaactgttacagtgaaaaataaccaggaaaccatgattaaaacagat
tttctaccaaaagcaaagcaaagagaagggactttttcaaaatctgattctgaaaaaata
gtgaatggaactaagagatcaagccggagagctggtaaagctgaacaaacagggaataaa
aggtctaagcccttaatgagatctgagccggagaaaaatactgaggaatctgttgaaggc
attgtagtcttagaaaataacccacctggtttgcttaatcaaacagaatgtgtgtcagat
aatcaggttcatctttctgaatctacaatggagcatgacaatacaaagcttaaagcagca
acagtggaaaatgctgtattattggaaactaatactgtagaggagaaaaatgtagaaatt
aatttggaatccaaagagaatacacccccagtagtaatatcagcagatcaaatggtaaat
gaggatagtcaggttcagataactccaaatcagaaaacccttagacggtcttcaaggcga
cgttcagaagtagtagagtctaccactgaaagccaagataaggaaaatagtcatcaaaaa
aaggaacgacgtaaggaagaagaaaaacctcttcagaagagtccattgcatataaaagat
gatgtgttacctaaacaaaaactgattgctgaacaaactctacaggagaatttaattgag
aaaggaagtaatttacatgagaagactcttggggaaactagtgctaatgcagaaactgaa
caaaataaaaaaaaggcagaccctgagaacattaagtctgagggggatggtacccaggac
attgtagataagtcctctgagaaactagtcagaggccgaacacggtatcaaactagaaga
gcatctcagggtttgctttccagcattgaaaactcagaatctgatagttcggaggcaaaa
gaagaaggttctaggaagaagagatctggaaaatggaaaaacaaaagcaatgaaagtgtt
gacattcaagatcaagaagagaaagtggtgaaacaggaatgtataaaagctgaaaatcag
tcacatgattataaagcaacttctgaagaagatgtaagcataaaatctccgatttgcgaa
aaacaagatgaaagtaatactgtaatatgtcaggattctacagtaacttcagatttgttg
caagttcctgatgatttaccaaatgtgtgtgaggaaaaaaatgaaactagcaaatatgca
gaatattcctttacaagtctacctgtgccagaatcaaatctaaggactagaaatgccatt
aagagattacataagcgagactcttttgataattgtagtttgggagaatcctcaaaaata
gggatatcagatatttcttcgctttcagaaaaaacttttcaaacacttgaatgccaacac
aagagaagtaggagggtgaggagatctaaaggttgtgattgctgtggggaaaaatcacaa
cctcaggaaaagtcactcattgggttaaagaatacagaaaataatgacgtagagattagt
gaaacaaaaaaggcagatgtgcaagcacctgtaagcccatcagaaacttctcaagctaat
ccatattctgaaggacaatttttagatgaacatcatagtgtgaattttcatttgggtctc
aaagaggataatgatactattaatgattcattaattgtttctgaaaccaaatcaaaagaa
aacactatgcaagaatctcttccttctggaatagtaaactttagagaggaaatttgtgat
atggattctagtgaagcaatgtctcttgaaagccaggagtcacctaatgaaaattttaaa
actgttggcccgtgtttaggagactcgaaaaatgtttcacaggaatctttggagacaaaa
gaagaaaaaccagaagaaaccccaaaaatggaactgagtctagagaatgttactgttgaa
ggaaatgcatgtaaagtaacagaatccaatctagagaaagcaaaaactatggaattgaat
gtaggaaatgaagctagctttcatggacaagagagaaccaaaactggtatttctgaagaa
gcagcaatagaagaaaataaaagaaatgatgactctgaagcagacacagctaaactgaat
gccaaagaagtagcaactgaggaatttaattcagatattagtctttctgataatactaca
cctgtaaaattgaatgctcaaactgagatttctgaacaaacagcagctggggaactagat
ggaggaaatgatgtatctgatctacactcatctgaagaaacgaataccaaaatgaaaaat
aatgaagaaatgatgatcggcgaggcaatggctgaaactggccatgatggtgaaacagag
aatgagggcataactaccaaaacctcaaagcctgatgaagctgaaacaaacatgttgact
gcagaaatggacaactttgtttgtgacacagttgaaatgagcactgaagaaggaatcatt
gacgctaataaaactgaaacaaatactgagtatagtaaatctgaagaaaaattagataac
aatcaaatggtaatggaaagtgatattttacaggaagatcaccatacttcacagaaagtg
gaggaaccatcacagtgtctggcatctggaacagctatctctgagctaataatagaagac
aataatgcatctcctcaaaaactaagggaacttgatccttcacttgtgtcagcaaatgac
agtcctagtggcatgcagacacgctgtgtctggtctcctttggcttctccgtctacgagc
attttaaagagaggactaaaaagatcccaagaagatgaaatctcatcacctgttaataag
gttcgccgtgtctcctttgcagatccaatataccaagcaggattggcagatgacattgat
agacggtgctctattgttaggtcccattcttccaatagttctcccataggaaaaagtgtt
aaaacttctcctactacacaatctaagcataataccacttcagccaaaggatttctgtcc
ccaggatcacgtagccctaaatttaagagctcaaagaagtgtttaatttcagaaatggcc
aaagaatccataccatgcccaacagaaagtgtttacccaccattggtgaactgtgtggca
ccagttgacatcattttacctcagattacatcaaacatgtgggcaagaggcctgggacaa
ctcattagagctaagaatataaaaactattggtgatttgagtactcttacagcatctgaa
ataaaaactcttcctatccgttctccaaaagtgtccaatgtaaaaaaggctctcagaata
tatcatgagcagcaggtgaagactcgtggactagaagagattccagtttttgatatttct
gaaaaaacagtaaatggaatagaaaataaatctttgtcacctgatgaagaaagacttgtc
tcagatataattgatcctgttgctttagaaattccattatccaaaaaccttctggcacag
attagtgctcttgctcttcagctggattcagaagatcttcataattattcaggaagccaa
ctatttgaaatgcacgagaaactaagttgtatggcaaactctgtaataaaaaatctacag
tcacgttggagatcaccatcccatgaaaattctatttag

KEGG   Homo sapiens (human): 22976
Entry
22976             CDS       T01001                                 
Symbol
PAXIP1, CAGF28, CAGF29, PACIP1, PAXIP1L, PTIP, TNRC2
Name
(RefSeq) PAX interacting protein 1
  KO
K14972  PAX-interacting protein 1
Organism
hsa  Homo sapiens (human)
Network
nt06506  Double-strand break repair
  Element
N01445  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    22976 (PAXIP1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     22976 (PAXIP1)
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 LIG3_BRCT SH3-A_UBE2O
Other DBs
NCBI-GeneID: 22976
NCBI-ProteinID: NP_031375
OMIM: 608254
HGNC: 8624
Ensembl: ENSG00000157212
UniProt: Q6ZW49
Structure
LinkDB
Position
7:complement(154943690..155003411)
AA seq 1069 aa
MSDQAPKVPEEMFREVKYYAVGDIDPQVIQLLKAGKAKEVSYNALASHIISEDGDNPEVG
EAREVFDLPVVKPSWVILSVQCGTLLPVNGFSPESCQIFFGITACLSQVSSEDRSALWAL
VTFYGGDCQLTLNKKCTHLIVPEPKGEKYECALKRASIKIVTPDWVLDCVSEKTKKDEAF
YHPRLIIYEEEEEEEEEEEEVENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNT
EKSKGELMFDDSSDSSPEKQERNLNWTPAEVPQLAAAKRRLPQGKEPGLINLCANVPPVP
GNILPPEVRGNLMAAGQNLQSSERSEMIATWSPAVRTLRNITNNADIQQMNRPSNVAHIL
QTLSAPTKNLEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQ
PQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQ
LHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRM
HQQQQQQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQPPPSPQQHQLFGHDPAVEI
PEEGFLLGCVFAIADYPEQMSDKQLLATWKRIIQAHGGTVDPTFTSRCTHLLCESQVSSA
YAQAIRERKRCVTAHWLNTVLKKKKMVPPHRALHFPVAFPPGGKPCSQHIISVTGFVDSD
RDDLKLMAYLAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEWRIPCVNAQWLGDILLGNF
EALRQIQYSRYTAFSLQDPFAPTQHLVLNLLDAWRVPLKVSAELLMSIRLPPKLKQNEVA
NVQPSSKRARIEDVPPPTKKLTPELTPFVLFTGFEPVQVQQYIKKLYILGGEVAESAQKC
THLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILRDAEAEVLFSFSL
EESLKRAHVSPLFKAKYFYITPGICPSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSS
LSEIILISCENDLHLCREYFARGIDVHNAEFVLTGVLTQTLDYESYKFN
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgtcggaccaggcgcccaaagttcctgaggagatgttcagggaggtcaagtattacgcg
gtgggcgacatcgacccgcaggttattcagcttctcaaggctggaaaagcgaaggaagtt
tcctacaatgcactagcctcacacataatctcagaggatggggacaatccagaggtggga
gaagctcgggaagtctttgacttacctgttgtaaagccttcttgggtgattctgtccgtt
cagtgtggaactcttctgccagtaaatggtttttctccagaatcatgtcagatttttttt
ggaatcactgcctgcctttctcaggtgtcatctgaagacagaagtgccctgtgggctttg
gttacgttctatgggggagattgccagctaaccctcaataagaaatgcacgcatttgatt
gttccagagccaaagggggagaaatacgaatgtgctttaaagcgagcaagtattaaaatt
gtgactcctgactgggttctggattgcgtatcagagaaaaccaaaaaggacgaagcattt
tatcatcctcgtctgattatttatgaagaggaagaagaggaagaggaagaggaggaggaa
gtagaaaatgaggaacaagattctcagaatgagggtagtacagatgagaagtcaagccct
gccagctctcaagaagggtctccttcaggtgaccagcagttttcacctaaatccaacact
gaaaaatctaaaggggaattaatgtttgatgattcttcagattcatcaccggaaaaacag
gagagaaatttaaactggaccccggccgaagtcccacagttagctgcagcaaaacgcagg
ctgcctcagggaaaggagcctgggttgattaacttgtgtgccaatgtcccacccgtccca
ggtaacattttgccccctgaggtccggggtaatttaatggctgctggacaaaacctccaa
agttctgaaagatcagaaatgatagctacctggagtccagctgtacggacactgaggaat
attactaataatgctgacattcagcagatgaaccggccatcaaatgtagcacatatctta
cagactctttcagcacctacgaaaaatttagaacagcaggtgaatcacagccagcaggga
catacaaatgccaatgcagtgctgtttagccaagtgaaagtgactccagagacacacatg
ctacagcagcagcagcaggcccagcagcagcagcagcagcacccggttttacaccttcag
ccccagcagataatgcagctccagcagcagcagcagcagcagatctctcagcaaccttac
ccccagcagccgccgcatccattttcacagcaacagcagcagcagcagcaagcccatccg
catcagttttcacagcaacagctacagtttccacagcaacagttgcatcctccacagcag
ctgcatcgccctcagcagcagctccagccctttcagcagcagcatgccctgcagcagcag
ttccatcagctgcagcagcaccagctccagcagcagcagcttgcccagctccagcagcag
cacagcctgctccagcagcagcagcaacagcagattcagcagcagcagctccagcgcatg
caccagcagcagcagcagcagcagatgcaaagtcagacagcgccacacttgagtcagacg
tcacaggcgctgcagcatcaggttccacctcagcagcccccgcagcagcagcagcaacag
cagccaccaccatcgcctcagcagcatcagctttttggacatgatccagcagtggagatt
ccagaagaaggcttcttattgggatgtgtgtttgcaattgcggattatccagagcagatg
tctgataagcaactgctggccacctggaaaaggataatccaggcacatggcggcactgtt
gaccccaccttcacgagtcgatgcacgcaccttctctgtgagagtcaagtcagcagcgcg
tatgcacaggcaataagagaaagaaagagatgtgttactgcacactggttaaacacagtc
ttaaagaagaagaaaatggtaccgccgcaccgagcccttcacttcccagtggccttccca
ccaggaggaaagccatgttcacagcatattatttctgtgactggatttgttgatagtgac
agagatgacctaaaattaatggcttatttggcaggtgccaaatatacgggttatctatgc
cgcagcaacacagtcctcatctgtaaagaaccaactggtttaaagtatgaaaaagccaaa
gagtggaggataccctgtgtcaacgcccagtggcttggcgacattcttctgggaaacttt
gaggcactgaggcagattcagtatagtcgctacacggcattcagtctgcaggatccattt
gcccctacccagcatttagttttaaatcttttagatgcttggagagttcccttaaaagtg
tctgcagagttgttgatgagtataagactacctcccaaactgaaacagaatgaagtagct
aatgtccagccttcttccaaaagagccagaattgaagacgtaccacctcccactaaaaag
ctaactccagaattgaccccttttgtgcttttcactggattcgagcctgtccaggttcaa
cagtatattaagaagctctacattcttggtggagaggttgcggagtctgcacagaagtgc
acacacctcattgccagcaaagtgactcgcaccgtgaagttcctgacggcgatttctgtc
gtgaagcacatagtgacgccagagtggctggaagaatgcttcaggtgtcagaagttcatt
gatgagcagaactacattctccgagatgctgaggcagaagtacttttctctttcagcttg
gaagaatccttaaaacgggcacacgtttctccactctttaaggcaaaatatttttacatc
acacctggaatctgcccaagtctttccactatgaaggcaatcgtagagtgtgcaggagga
aaggtgttatccaagcagccatctttccggaagctcatggagcacaagcagaactcgagt
ttgtcggaaataattttaatatcctgtgaaaatgaccttcatttatgccgagaatatttt
gccagaggcatagatgttcacaatgcagagttcgttctgactggagtgctcactcaaacg
ctggactatgaatcatataagtttaactga

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