KEGG   Homo sapiens (human): 80152
Entry
80152             CDS       T01001                                 
Symbol
CENPT, C16orf56, CENP-T, SSMGA
Name
(RefSeq) centromere protein T
  KO
K11512  centromere protein T
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Disease
H02607  Short stature and microcephaly with genital anomalies
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    80152 (CENPT)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     80152 (CENPT)
SSDB
Motif
Pfam: CENP-T_N CENP-T_C CENP-S CBFD_NFYB_HMF Bromo_TP Histone TFIID-18kDa
Other DBs
NCBI-GeneID: 80152
NCBI-ProteinID: NP_079358
OMIM: 611510
HGNC: 25787
Ensembl: ENSG00000102901
UniProt: Q96BT3 B3KPB2
Structure
LinkDB
Position
16:complement(67828157..67847693)
AA seq 561 aa
MADHNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETASPRKLSGQTRTIAR
GRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQP
SRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNA
DASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLED
TQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEA
EEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEE
AEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPA
PAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKAL
EMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLP
LEYRQLLIPCAYSGNSVFPAQ
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggctgaccacaaccctgacagcgactccacgccgcgcacgctgctgcgacgcgtgctg
gatacagcggacccgcgcaccccgcggcgaccccggagtgctcgggctggagcccggaga
gccctgcttgaaacggcttcccccaggaagttgagtggccaaacaaggacgatagccaga
gggcgttcccatggagccaggtctgttggcagatcggcccatattcaggccagtgggcac
ttggaggaacagacacctcggacgctgctgaagaacatcctactaactgccccagaatct
tccatcctgatgcctgagtcggtagtgaagccagtgccagcaccgcaggcggtccaaccc
tccagacaagagagcagttgcggcagcctggagctgcaacttcctgagctcgagcccccc
acaaccctggctccaggtctgctggcccctggcaggaggaaacagaggctgagactgtca
gtgtttcagcagggagtggaccaggggctgtctctctcccaagagcctcaagggaatgct
gatgcctcttccctcaccagatccctcaacctgacctttgccacacctcttcagccacag
tcagtgcagaggcctggcttggcccgcagacctccagcccgccgagctgtagacgtgggt
gcctttttgcgggatctgcgagatacttccctggctcctccaaacattgtgttggaggac
acccagccgttctctcagcccatggttggctcccccaacgtgtatcactccctgccctgc
acgcctcacactggggctgaagacgctgagcaggctgccggtcgcaagacacagagcagt
gggcctgggctgcagaagaatagccctgggaaaccagcccagtttctggcaggagaggca
gaggaggtcaatgcctttgctctgggcttcctgagcaccagcagtggtgtctctggagaa
gatgaagtagagcccttacacgatggagttgaagaggcagagaaaaagatggaagaagaa
ggtgtgagtgtgagtgaaatggaggcaacaggagcacaaggacccagcagggtagaagag
gctgagggacacacagaggtgacagaagcagagggatcccaggggactgctgaggctgac
gggccaggagcatcttcaggggatgaggatgcctctggcagggcagcaagtccagagtcg
gcctccagcacccctgagtctctccaggccaggcgacatcatcagtttcttgagccagcc
ccagcgcctggtgctgcagtcttatcttcagagcctgcagagcctctgttggtcaggcat
ccccctaggccccggaccaccggccccaggccccggcaagatccccacaaggctggactg
agccactatgtgaaactctttagcttctatgccaagatgcccatggagaggaaggctctt
gagatggtggagaagtgcctagataaatatttccagcatctttgtgatgatctggaggta
tttgctgctcatgctggccgcaagactgtgaagccagaggacctggagctgctgatgcgg
cggcagggcctggtcactgaccaagtctcactgcacgtgctagtggagcggcacctgccc
ctggagtaccggcagctgctcatcccctgtgcatacagtggcaactctgtcttccctgcc
cagtag

KEGG   Homo sapiens (human): 387103
Entry
387103            CDS       T01001                                 
Symbol
CENPW, C6orf173, CENP-W, CUG2
Name
(RefSeq) centromere protein W
  KO
K26091  centromere protein W
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    387103 (CENPW)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     387103 (CENPW)
SSDB
Motif
Pfam: CENP-W CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 387103
NCBI-ProteinID: NP_001012525
OMIM: 611264
HGNC: 21488
Ensembl: ENSG00000203760
UniProt: Q5EE01
Structure
LinkDB
Position
6:126340115..126483320
AA seq 88 aa
MALSTIVSQRKQIKRKAPRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRT
NACASKCRVINKEHVLAAAKVILKKSRG
NT seq 267 nt   +upstreamnt  +downstreamnt
atggcgctgtcgaccatagtctcccagaggaagcagataaagcggaaggctccccgtggc
tttctaaagcgagtcttcaagcgaaagaagcctcaacttcgtctggagaaaagtggtgac
ttattggtccatctgaactgtttactgtttgttcatcgattagcagaagagtccaggaca
aacgcttgtgcgagtaaatgtagagtcattaacaaggagcatgtactggccgcagcaaag
gtaattctaaagaagagcagaggttag

KEGG   Homo sapiens (human): 378708
Entry
378708            CDS       T01001                                 
Symbol
CENPS, APITD1, CENP-S, FAAP16, MHF1
Name
(RefSeq) centromere protein S
  KO
K11511  centromere protein S
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01464  Fanconi anemia pathway
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    378708 (CENPS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    378708 (CENPS)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    378708 (CENPS)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     378708 (CENPS)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     378708 (CENPS)
SSDB
Motif
Pfam: CENP-S CENP-T_C Histone TFIID-31kDa COMMD1_N DASH_Dad2 Bromo_TP DUF4087
Other DBs
NCBI-GeneID: 378708
NCBI-ProteinID: NP_954988
OMIM: 609130
HGNC: 23163
Ensembl: ENSG00000175279
UniProt: Q8N2Z9
Structure
LinkDB
Position
1:10430433..10442808
AA seq 138 aa
MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN
FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED
GSKNSRQPAEAGVVESEN
NT seq 417 nt   +upstreamnt  +downstreamnt
atggaggaggaggcggagaccgaggagcagcagcgattctcttaccaacagaggctaaag
gcagcagttcactatactgtgggttgtctttgcgaggaagttgcattggacaaagagatg
cagttcagcaaacagaccattgcggccatttcggagctgactttccgacagtgtgaaaat
tttgccaaagaccttgaaatgtttgcaagacatgcgaaaagaaccacaattaacactgaa
gatgtgaagctcttagccaggaggagtaattcactgctaaaatacatcacagacaaaagt
gaagagattgctcagattaacctagaacgaaaagcacagaagaaaaagaagtcagaggat
ggaagcaaaaattcaaggcagccagcagaggctggagtggtggaaagtgagaattaa

KEGG   Homo sapiens (human): 201254
Entry
201254            CDS       T01001                                 
Symbol
CENPX, CENP-X, D9, FAAP10, MHF2, STRA13
Name
(RefSeq) centromere protein X
  KO
K15360  centromere protein X
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01464  Fanconi anemia pathway
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    201254 (CENPX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    201254 (CENPX)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     201254 (CENPX)
SSDB
Motif
Pfam: CENP-X CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 201254
NCBI-ProteinID: NP_001257935
OMIM: 615128
HGNC: 11422
Ensembl: ENSG00000169689
UniProt: A8MT69
Structure
LinkDB
Position
17:complement(82018703..82022878)
AA seq 81 aa
MEGAGAGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAE
DALRVDVDQLEKVLPQLLLDF
NT seq 246 nt   +upstreamnt  +downstreamnt
atggagggagcaggagctggatccggcttccggaaggagctggtgagcaggctgctgcac
ctgcacttcaaggatgacaagaccaaagtgagcggggacgcgctgcagctcatggtggag
ttgctgaaggtcttcgttgtggaagcagcagtccgcggcgtgcggcaggcccaggcagaa
gacgcgctccgtgtggacgtggaccagctggagaaggtgcttccgcagctgctcctggac
ttctag

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