Homo sapiens (human): 80153
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Entry
80153 CDS
T01001
Symbol
EDC3, LSM16, MRT50, YJDC, YJEFN2, hYjeF_N2-15q23
Name
(RefSeq) enhancer of mRNA decapping 3
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
hsa
Homo sapiens (human)
Pathway
hsa03018
RNA degradation
Disease
H00768
Autosomal recessive intellectual developmental disorder
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
80153 (EDC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
80153 (EDC3)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
80153 (EDC3)
mRNA degradation factors
5'-3' decay
Decapping complex
80153 (EDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Edc3_linker
FDF
YjeF_N
LSM14
DUF5096
Motif
Other DBs
NCBI-GeneID:
80153
NCBI-ProteinID:
NP_001135915
OMIM:
609842
HGNC:
26114
Ensembl:
ENSG00000179151
UniProt:
Q96F86
Structure
PDB
PDBj
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All DBs
Position
15:complement(74630558..74696024)
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AA seq
508 aa
AA seq
DB search
MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDIT
ELKILEIPGPGDNQHFGDLHQTELGPSGAGCQVGINQNGTGKFVKKPASSSSAPQNIPKR
TDVKSQDVAVSPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLK
NGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNER
PTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSGLVVPSISYELHKKLLSVAEKHGLT
LERRLEMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANH
DVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLDCPENVFLR
DQPWYKAAVAWANQNRAPVLSIDPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIG
IPQQVFQEVGINYHSPFGCKFVIPLHSA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctacagattggctgggaagtattgtgtccatcaattgtggagatagcttgggtgtc
tatcagggaagagtgtcagctgtggatcaggtcagccagaccatttctctcacccggcct
ttccataatggagtgaagtgtcttgttccagaagtcaccttcagggcaggtgacattacg
gagttaaaaattctggagataccaggacctggagacaaccaacattttggagaccttcat
caaacagaattaggcccctctggtgctggctgccaagtgggcatcaatcagaatggcaca
ggcaagtttgtcaagaagccagcctcttccagcagtgcccctcagaatatccctaagagg
acagatgtgaagagccaggatgttgccgtttccccgcagcagcaacagtgctcaaagagc
tatgtcgacaggcacatggaatccttgagtcagtccaaaagtttccgtcgtcggcacaac
tcctggtcatctagtagcaggcacccaaatcaggcaactcccaagaaaagtggtttaaag
aatggccagatgaagaataaagatgacgagtgcttcggggatgatattgaggagatccca
gacacagattttgattttgaagggaacctggctctttttgacaaggcagctgtgtttgag
gagattgatacctatgaaaggagaagtggtacccgttcccggggcatcccaaatgaaagg
cccactcggtaccgccatgatgagaacatcttggagtccgagcccattgtctatcgacgg
atcatagtgccccacaacgtgagcaaggagttctgcacggactctggcctggttgtccca
agtatttcctatgagctgcataaaaagctgttgtccgtggctgagaagcatgggctgacc
cttgagcggagactggagatgacaggtgtgtgtgccagtcagatggcactgaccctcctc
ggaggacctaacaggttgaatcccaaaaatgttcaccagaggcctacagtggctctactg
tgtggacctcatgtgaagggggctcagggtatcagctgtggaaggcacctagccaaccat
gatgtccaggtcatccttttcctgcccaattttgtcaagatgttggaatctatcaccaat
gagctgtcgctcttcagcaagacccaaggccaacaagtgtctagcctcaaagatctgccc
actagccctgtggacctggtcatcaactgcctggattgccctgagaacgtcttcctgcgc
gatcaaccctggtacaaggcagctgtggcctgggccaaccagaaccgggcaccagtactc
agcatagaccctcctgtgcatgaagtcgaacagggcattgatgccaaatggtcactggca
ctgggcctgcctctgccactgggggagcacgcaggccgtatctatttgtgcgacattggc
attccccagcaggtcttccaggaggtgggcatcaactaccactcgccctttggctgcaag
tttgttatcccactgcactctgcttag
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