Homo sapiens (human): 84250
Help
Entry
84250 CDS
T01001
Symbol
SLF1, ANKRD32, BRCTD1, BRCTx, hNSE5
Name
(RefSeq) SMC5/6 complex localization factor 1
KO
K26126
SMC5-SMC6 complex localization factor protein 1
Organism
hsa
Homo sapiens (human)
Network
nt06506
Double-strand break repair
Element
N01636
Loading of the SMC5-SMC6 complex
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsa03400
]
84250 (SLF1)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
84250 (SLF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_TopB1_SLF1
Ank_2
Ank
Ank_3
Ank_5
Ank_4
RTT107_BRCT_5
DUF5327
Motif
Other DBs
NCBI-GeneID:
84250
NCBI-ProteinID:
NP_115666
OMIM:
618467
HGNC:
25408
Ensembl:
ENSG00000133302
UniProt:
Q9BQI6
I6L9F1
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:94618231..94697621
Genome browser
AA seq
1058 aa
AA seq
DB search
MEDGTPKHIIQMTGFKMEEKEALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAA
CAAGKWILTKDYIIHSAKSGRWLDETTYEWGYKIEKDSRYSPQMQSAPKRWREELKRTGA
PGAFHRWKVVLLVRTDKRSDSLIRVLEAGKANVILPKSSPSGITHVIASNARIKAEKEKD
NFKAPFYPIQYLGDFLLEKEIQNDEDSQTNSVWTEHSNEETNKDFRKDAGFLEMKGALRE
TMYRTQKEMQNHEDVNVGSILIQHHKKEKFSGSSKDLKFVKMRNTFGSHTYENQKEIKKK
DEDIQRSYTLRRKRKKGKESNCKKGVEHEKIKSTLRRHIYNRDQKEMKNSIFAEYAKESK
AMAIKTDVDVVEIKNTLRKHIYRAQAVRYNCIRIDKQPVYNVEVKNAEFPRGVLNLIESL
IEGHFFKEAIEELSTLQAHYIPPVCVLHALLENVLQDNIDTFSGRYFHILSALLHLHPPW
KSPAMSRYYLELFQCPTCMKGAWSLVEVLIRSCLFNESFCHQISENIGSKVLHLTLLKFF
FNLIESEVQHLSQKLYDWSDSQNLKITGKAMLLEIFWSGSETSGLLTKPVNMLLEWTIYS
HKEKFKSNDVFKHELAYLLAGILGAAIDYWIFLGLKMGRNVMRHMSDDLGSYVSLSCDDF
SSQELEIFICSFSSSWLQMFVAEAVFKKLCLQSSGSVSSEPLSLQKMVYSYLPALGKTGV
LGSGKIQVSKKIGQRPCFDSQRTLLMLNGTKQKQVEGLPELLDLNLAKCSSSLKKLKKKS
EGELSCSKENCPSVVKKMNFHKTNLKGETALHRACINNQVEKLILLLSLPGIDINVKDNA
GWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGGP
VLLQQRNAKGELPLDYVVSPQIKEELFAITKIEDTVENFHAQAEKHFHYQQLEFGSFLLS
RMLLNFCSIFDLSSEFILASKGLTHLNELLMACKSHKETTSVHTDWLLDLYAGNIKTLQK
LPHILKELPENLKVCPGVHTEALMITLEMMCRSVMEFS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggtaccccaaagcatatcatccagatgacaggatttaagatggaagaaaaa
gaagcgctagtcaaattacttttaaaactagattgcacttttattaagagtgagaaatac
aaaaattgtacacatcttatagctgaacgcctatgtaagagtgaaaaatttttagcagct
tgtgcggcaggaaagtggatactaaccaaggactatataattcatagtgccaaaagtggc
agatggcttgatgaaacaacttatgaatggggatataaaattgaaaaagattcccgttat
tcacctcaaatgcaatctgcacctaaaagatggcgtgaagaactgaaacgcactggtgct
ccaggagccttccacagatggaaagttgtcctccttgttagaactgataagcgaagtgat
tctcttataagagttttggaggctggaaaggcaaatgttattttaccaaaaagttcacca
agtggaataactcatgtgattgccagtaatgcaagaattaaagctgagaaagaaaaagat
aactttaaggctccattttatccaattcagtatctaggggattttcttttagagaaagaa
attcagaatgatgaagattcccaaaccaattctgtttggactgaacatagcaatgaagaa
acaaacaaagatttcaggaaagatgcaggatttcttgaaatgaaaggtgccttaagagag
accatgtatagaacccagaaagaaatgcaaaatcatgaagatgttaatgttggttctatt
ttgattcaacatcacaaaaaagaaaaattcagtggttccagtaaagatttgaaatttgtt
aaaatgagaaatacctttggaagccatacatatgaaaatcagaaggaaattaagaaaaaa
gatgaagatattcagaggagttatactttgaggagaaaacgcaagaaaggaaaagaaagc
aattgcaagaaaggcgttgaacatgaaaaaataaaaagtaccttaagaaggcacatatat
aatagagatcagaaagaaatgaagaattctatttttgctgaatatgccaaagaatcaaaa
gccatggctattaagacagatgtggatgttgttgaaataaaaaataccttaaggaagcac
atatatagagctcaggctgtcagatacaactgcattagaatagataaacaaccagtgtac
aacgtagaggttaaaaatgctgaatttcccagaggtgtattaaatttaattgaaagcctc
atagaaggacatttttttaaagaagcaattgaggaactttccactttgcaggcacattat
atccctcctgtatgcgttcttcatgcccttctagagaacgttctacaggataacatagat
acattttctggtcgatactttcatatattgtcagctcttcttcacctgcatcctccttgg
aagtctccagccatgtcgagatattatttagagttgtttcagtgtccaacttgtatgaaa
ggagcatggtctttagtagaagtccttatcaggtcttgccttttcaatgaaagcttttgt
catcaaatttcagaaaatattggctccaaggtgctccacctgacgctactcaaatttttc
tttaatttaattgaaagtgaagtacaacatctgagtcaaaagttgtatgactggtcagat
tctcagaatctgaaaataacaggaaaggcaatgcttcttgaaattttttggtcaggaagt
gaaacctctgggcttttgaccaaaccagtaaatatgcttttggaatggactatatattct
cacaaggaaaaattcaagtctaatgatgtcttcaaacatgaactagcttacttattggct
ggaattcttggagcagcaatagattattggattttccttggtcttaagatgggtagaaat
gtgatgcgacacatgtctgatgacttaggaagttatgtttctctttcgtgtgatgacttt
tcttcacaggaattagagattttcatttgctccttttcctcctcctggcttcaaatgttt
gttgcagaggcagtctttaaaaagttgtgtctacagagctctggcagtgtttcttctgag
ccactctctcttcagaaaatggtatattcctatttaccagccttggggaaaactggtgtg
cttgggtctggaaagattcaggtgtcaaagaaaataggacagcggccttgttttgactct
cagagaaccttactaatgctgaatggtactaaacaaaaacaagtcgaagggctgccagag
ttactagacctgaaccttgctaaatgttcctcatcattaaaaaaattgaaaaagaagtca
gaaggagaattgtcatgttccaaggagaattgcccctctgtagttaaaaagatgaatttt
cacaagactaatctaaaaggagaaacagccctgcatagagcttgcataaataaccaagtg
gagaaattgattcttcttctctctttgccaggaatagacatcaatgttaaagacaatgct
ggctggacgcctttgcatgaagcctgtaactatggcaacacagtgtgtgtccaggaaatt
ttgcaacgttgtccagaggtagatctgctcactcaagtggacggggtgactcctttgcat
gatgcactgtcaaacggacatgtagaaattggcaagctgctactacagcatgggggccca
gtgcttttacaacagaggaatgctaagggagaattgcccttggattatgtggtttcacct
caaatcaaagaagaactgtttgctattacaaaaatagaagatacagtggagaactttcat
gcacaagcagagaaacattttcattaccagcaacttgaatttggctcctttttacttagt
aggatgttgctaaatttttgttcaatttttgatttatcttcagagttcattttagcttcc
aaagggttaactcatctaaatgaactgcttatggcttgtaaaagtcataaagaaaccacc
agtgttcatactgactggttactggatctttatgctggaaatataaagacattgcagaaa
ctcccacacattcttaaggaactgcctgagaatttgaaagtgtgtcctggggtacacact
gaggccttgatgataacattggaaatgatgtgtcggtcagtcatggagttttcatga
Homo sapiens (human): 55719
Help
Entry
55719 CDS
T01001
Symbol
SLF2, ATELS1, C10orf6, FAM178A, hNSE6
Name
(RefSeq) SMC5/6 complex localization factor 2
KO
K26127
SMC5-SMC6 complex localization factor protein 2
Organism
hsa
Homo sapiens (human)
Network
nt06506
Double-strand break repair
Element
N01636
Loading of the SMC5-SMC6 complex
Disease
H02639
Atelis syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsa03400
]
55719 (SLF2)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
55719 (SLF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CANIN
Motif
Other DBs
NCBI-GeneID:
55719
NCBI-ProteinID:
NP_060591
OMIM:
610348
HGNC:
17814
Ensembl:
ENSG00000119906
UniProt:
Q8IX21
Structure
PDB
PDBj
LinkDB
All DBs
Position
10:100912963..100965134
Genome browser
AA seq
1173 aa
AA seq
DB search
MTRRCMPARPGFPSSPAPGSSPPRCHLRPGSTAHAAAGKRTESPGDRKQSIIDFFKPASK
QDRHMLDSPQKSNIKYGGSRLSITGTEQFERKLSSPKESKPKRVPPEKSPIIEAFMKGVK
EHHEDHGIHESRRPCLSLASKYLAKGTNIYVPSSYHLPKEMKSLKKKHRSPERRKSLFIH
ENNEKNDRDRGKTNADSKKQTTVAEADIFNNSSRSLSSRSSLSRHHPEESPLGAKFQLSL
ASYCRERELKRLRKEQMEQRINSENSFSEASSLSLKSSIERKYKPRQEQRKQNDIIPGKN
NLSNVENGHLSRKRSSSDSWEPTSAGSKQNKFPEKRKRNSVDSDLKSTRESMIPKARESF
LEKRPDGPHQKEKFIKHIALKTPGDVLRLEDISKEPSDETDGSSAGLAPSNSGNSGHHST
RNSDQIQVAGTKETKMQKPHLPLSQEKSAIKKASNLQKNKTASSTTKEKETKLPLLSRVP
SAGSSLVPLNAKNCALPVSKKDKERSSSKECSGHSTESTKHKEHKAKTNKADSNVSSGKI
SGGPLRSEYGTPTKSPPAALEVVPCIPSPAAPSDKAPSEGESSGNSNAGSSALKRKLRGD
FDSDEESLGYNLDSDEEEETLKSLEEIMALNFNQTPAATGKPPALSKGLRSQSSDYTGHV
HPGTYTNTLERLVKEMEDTQRLDELQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEE
HKEFLKKFSVTIDAIPDHHPGEEIFNFLNSGKIFNQYTLDLRDSGFIGQSAVEKLILKSG
KTDQIFLTTQGFLTSAYHYVQCPVPVLKWLFRMMSVHTDCIVSVQILSTLMEITIRNDTF
SDSPVWPWIPSLSDVAAVFFNMGIDFRSLFPLENLQPDFNEDYLVSETQTTSRGKESEDS
SYKPIFSTLPETNILNVVKFLGLCTSIHPEGYQDREIMLLILMLFKMSLEKQLKQIPLVD
FQSLLINLMKNIRDWNTKVPELCLGINELSSHPHNLLWLVQLVPNWTSRGRQLRQCLSLV
IISKLLDEKHEDVPNASNLQVSVLHRYLVQMKPSDLLKKMVLKKKAEQPDGIIDDSLHLE
LEKQAYYLTYILLHLVGEVSCSHSFSSGQRKHFVLLCGALEKHVKCDIREDARLFYRTKV
KDLVARIHGKWQEIIQNCRPTQGQLHDFWVPDS
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggcgctgcatgcccgctaggccaggtttcccctcatccccagccccggggtcg
tcgcccccgcgctgccatctgagacccggtagtaccgcccatgctgcagcgggaaagaga
acagagagtcctggggacaggaagcagtcaattatagatttcttcaaaccagcttcaaaa
caagacagacacatgttggattcaccacaaaaatcaaacatcaaatatggaggaagtaga
ttgtctatcactgggacagagcagtttgaaaggaaactatcctcaccaaaagaatctaaa
cccaaaagggtgccaccagaaaagagccctattatagaagctttcatgaaaggtgttaaa
gagcaccatgaagatcatggtatacatgagtcacgtcggccttgtctgtcactagcctcc
aaatatttagccaaaggaacaaatatctatgttccttcttcatatcacttgccaaaggag
atgaagtcactaaagaaaaaacatcgatccccagagagaaggaagtcactattcattcat
gaaaataatgagaagaatgatagagatcgaggcaaaaccaatgcagactccaaaaagcag
accacagtggcagaagctgacatcttcaataacagctccagaagccttagcagcaggagc
agcctgtccaggcaccacccggaagaaagcccactgggagctaaattccagttgtcacta
gcttcttactgcagagaacgagaactaaagaggttgagaaaggagcaaatggagcagaga
atcaactccgagaattctttctcagaagcaagcagtctttccttaaaatctagtatagaa
agaaaatataaaccaaggcaggaacaaaggaaacagaatgacatcatacctggaaaaaat
aatctgtcaaatgtggaaaatggacatctctcaagaaaaagatcctcttctgattcatgg
gaacctacttcagcaggctctaagcagaataaattccctgaaaaaagaaaaaggaactct
gtggactcagatctgaaaagcacaagagaatctatgataccaaaagcaagagagtccttc
cttgagaagcgtcctgatggaccacatcagaaagaaaaatttataaaacatattgcactg
aagacacctggtgatgtgttgcgcttagaagatatatccaaggaaccgagtgatgaaact
gatggctcttctgcaggcttggcaccttcaaattctggcaattctggccaccattctacc
aggaatagtgaccaaatccaagtggcaggtaccaaggagactaagatgcagaaaccccac
ttacctttatctcaggaaaagtctgcaattaaaaaagctagcaaccttcagaaaaataaa
accgctagctccacgacaaaggagaaggagacaaaactacctttactttcccgtgttcca
agtgctggttcctctctagtaccattaaatgctaaaaattgtgctcttccagtttctaaa
aaagataaagagcgttcctcatctaaagaatgttctgggcattctacagaatccaccaaa
cacaaggaacacaaagcaaagactaataaggccgattctaatgtatcttcagggaaaatt
tctgggggacctttgcgctcagaatatggcactcctacaaagtctccccctgctgctttg
gaagttgtgccatgtatcccaagccctgcagcaccttcagataaagccccttcagaagga
gagagttcaggaaattccaatgcaggtagcagtgcactgaaaagaaaactaaggggtgat
tttgatagtgatgaagaaagtttaggttacaacctagacagtgatgaggaagaggaaaca
ttaaagtcactggaagaaataatggctttgaacttcaatcagactcctgcagctacagga
aagcctcctgctctttccaaggggcttagatctcagtcatcagactatacaggacatgtt
catcctggaacttacacaaataccttagaacgtctagtgaaggaaatggaagacacacaa
aggctagatgaactgcagaagcaactacaagaagacataaggcaaggccgaggcattaaa
tccccaatcagaattggagaagaagacagtacagatgatgaggatggcctcttagaagag
cacaaggaatttctaaagaaattttcagttacaattgatgctattcctgatcatcatcca
ggtgaagaaatatttaatttcctcaattctggaaaaattttcaatcagtataccttggat
ttaagagactctggttttattggacaaagtgctgtagaaaaacttattcttaaatcggga
aaaacagatcagatttttttgacaacacaaggtttccttacgtctgcttatcactatgtc
cagtgtcctgtccctgtgttaaagtggctgtttcggatgatgtcagttcatacagactgt
attgtgtcagtgcagattttaagtacattgatggaaataacaattagaaatgataccttc
agtgactcaccagtttggccatggatcccatcattgtctgatgtagcagctgtgtttttc
aatatggggattgattttagatctttgtttcccctggagaatcttcagccagactttaat
gaagactatctagtttctgaaacacagacaacatcaagggggaaagaaagtgaagattca
tcttataagccaattttttcaacacttcctgaaaccaacattttaaatgtggttaagttt
ctaggcttgtgtacatctatacatccagaaggttaccaggatcgtgaaataatgttgctg
attttaatgttatttaaaatgagtttggaaaaacagctgaaacagattcctttagtagac
tttcaaagcctcctgataaacctgatgaaaaacatcagagattggaacacaaaggtgcct
gaactctgtctgggcataaatgaactctccagtcatccccacaacctcctgtggttggta
cagctggtccctaattggacatcacgtggaaggcaactgagacagtgcctcagtctagtg
attatttcaaagcttttggatgagaaacacgaagatgttcctaatgccagtaatctgcag
gtatcagtcctacatcgctatcttgtgcagatgaagccttctgatttgttaaagaaaatg
gtcttgaagaaaaaggctgaacaaccagatggcattattgatgacagtcttcatttagaa
cttgaaaagcaggcatattacctgacctacattcttcttcatttagtcggtgaagttagt
tgttctcattctttttcttctggacaacggaaacactttgtgctactctgtggggctttg
gaaaagcatgttaaatgtgatattagggaagatgcaagacttttttacagaactaaggtg
aaagacttggtcgccaggatacatggaaaatggcaggaaataatccagaactgtcggcct
actcaggggcagcttcatgacttctgggtaccagattcttaa
DBGET
integrated database retrieval system
