Homo sapiens (human): 84950
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Entry
84950 CDS
T01001
Symbol
PRPF38A, PRP38A, Prp38
Name
(RefSeq) pre-mRNA processing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
hsa
Homo sapiens (human)
Pathway
hsa03040
Spliceosome
Network
nt06547
Spliceosome
Element
N01970
Spliceosome assembly (B complex formation)
N01971
spliceosome activation
N01972
Spliceosome catalysis (branching)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
84950 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
84950 (PRPF38A)
Spliceosome [BR:
hsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
84950 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
84950
NCBI-ProteinID:
NP_116253
OMIM:
617031
HGNC:
25930
Ensembl:
ENSG00000134748
UniProt:
Q8NAV1
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:52404602..52420836
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgtacagtgaaggatgcgcacagcatccatggcaccaaccctcaatatctg
gtggagaagatcattcgaacgcgaatctatgagtccaagtactggaaagaggagtgcttt
ggacttacagctgaacttgtagtcgataaagccatggagttaaggtttgtgggtggcgtc
tatggtggcaacataaaaccaacaccctttctgtgtttaaccttgaagatgcttcaaatt
caacccgagaaggatatcattgtagagtttatcaaaaatgaagatttcaagtatgtccgc
atgctgggggcactttacatgaggctgacaggcactgcaattgattgctacaagtacttg
gaacctttgtacaatgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ttgatgcatgttgatgagtttattgatgaactattgcacagtgagagagtctgtgatatc
attctgccccgactacagaaacgctatgtattagaggaagctgagcaactggagcctcga
gttagtgctctggaagaggacatggatgatgtggagtccagtgaagaggaagaagaggag
gatgagaagttggaaagagtgccatcacctgatcaccgccggagaagctaccgagacttg
gacaagccccgtcgctctcccacactgcgctacaggaggagtaggagccggtctcccaga
aggcggagtcgatctcccaaaaggagaagcccctcccctcgccgagaaaggcatcggagc
aagagtccaagacgtcaccgcagcaggtcccgagatcggcggcacagatcccgttccaag
tccccaggtcatcaccgtagtcacagacacaggagccactcaaagtctcccgaaaggtct
aagaagagccacaagaagagccggagagggaatgagtaa
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