Homo sapiens (human): 9128
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Entry
9128 CDS
T01001
Symbol
PRPF4, HPRP4, HPRP4P, PRP4, Prp4p, RP70, SNRNP60
Name
(RefSeq) pre-mRNA splicing tri-snRNP complex factor PRPF4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hsa
Homo sapiens (human)
Pathway
hsa03040
Spliceosome
Disease
H00527
Retinitis pigmentosa
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9128 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
9128 (PRPF4)
Spliceosome [BR:
hsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
9128 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
9128
NCBI-ProteinID:
NP_004688
OMIM:
607795
HGNC:
17349
Ensembl:
ENSG00000136875
UniProt:
O43172
Structure
PDB
PDBj
LinkDB
All DBs
Position
9:113275658..113292905
Genome browser
AA seq
522 aa
AA seq
DB search
MASSRASSTQATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS
PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH
QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY
HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgcgagcctcttccacgcaggcaaccaaaactaaagcacccgacgactta
gttgctccggtcgtgaagaaaccacacatctattatggaagtttggaagagaaggagagg
gagcgtctggccaaaggagagtctgggattttggggaaagacggacttaaagcagggatc
gaagctggaaatattaatataacctctggagaagtgtttgaaattgaagagcatatcagc
gagcgacaggcagaagtattggctgagtttgagagaaggaagcgagcccggcagatcaat
gtttccacagatgactcagaggtcaaagcttgccttagagccttgggggaacccatcaca
ctttttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctctcagttgtc
ggtactgatgccttgaaaaagaccaaaaaggatgatgagaagtctaaaaagtccaaagaa
gagtatcagcaaacctggtatcatgaaggaccaaatagcttgaaggtggcaagactatgg
attgctaattattcgttgcccagggcaatgaaacgcttggaagaggcccgactccataag
gagattcctgagacaacaaggacctcccagatgcaagagctgcacaagtctctccggtct
ttgaataatttttgcagtcagattggggatgatcggcctatctcctactgtcactttagt
cccaattccaagatgctggccacagcttgttggagtgggctttgcaagctctggtctgtt
cctgattgcaacctccttcacactcttcgagggcataacacaaatgtaggagcaattgta
ttccatcccaaatccactgtctccttggacccaaaagatgtcaacctggcctcttgtgcg
gctgatggctctgtgaagctttggagtctcgacagtgatgaaccagtggcagatattgaa
ggccatacagtgcgtgtggcgcgggtaatgtggcatccttcaggacgtttcctgggcacc
acctgctatgaccgttcatggcgcttatgggatttggaggctcaagaggagatcctgcat
caggaaggccatagcatgggtgtgtatgacattgccttccatcaagatggctctttggct
ggcactgggggactggatgcatttggtcgagtttgggacctacgcacaggacgttgtatc
atgttcttagaaggccacctgaaagaaatctatggaataaatttctcccccaatggctat
cacattgcaaccggcagtggtgacaacacctgcaaagtgtgggacctccgacagcggcgt
tgcgtctacaccatccctgctcatcagaacttagtgactggtgtcaagtttgagcctatc
catgggaacttcttgcttactggtgcctatgataacacagccaagatctggacgcaccca
ggctggtccccgctgaagactctggctggccacgaaggcaaagtgatgggcctagatatt
tcttccgatgggcagctcatagccacttgctcatatgacaggaccttcaagctgtggatg
gctgaatag
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integrated database retrieval system
