Homo sapiens (human): 9742
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Entry
9742 CDS
T01001
Symbol
IFT140, MZSDS, RP80, SRTD9, WDTC2, c305C8.4, c380F5.1, gs114
Name
(RefSeq) intraflagellar transport 140
KO
K19672
intraflagellar transport protein 140
Organism
hsa
Homo sapiens (human)
Disease
H00527
Retinitis pigmentosa
H00529
Cranioectodermal dysplasia
H00542
Polycystic kidney disease
H02157
Short-rib thoracic dysplasia
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsa03037
]
9742 (IFT140)
Cilium and associated proteins [BR:
hsa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
9742 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_HPS5
WD40_Prp19
TPR_GEMI5
Beta-prop_CAF1B_HIR1
TPR_IFT80_172
WD40
TPR_COPA_B
Beta-prop_WDR75_1st
PPR_2
tRNA_int_end_N2
WD40_MABP1-WDR62_1st
SGL
TPR_14
Motif
Other DBs
NCBI-GeneID:
9742
NCBI-ProteinID:
NP_055529
OMIM:
614620
HGNC:
29077
Ensembl:
ENSG00000187535
UniProt:
Q96RY7
Structure
PDB
PDBj
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Position
16:complement(1510427..1612072)
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AA seq
1462 aa
AA seq
DB search
MALYYDHQIEAPDAAGSPSFISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVER
PFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPLTHTADITVLRWSPSGNCLLS
GDRLGVLLLWRLDQRGRVQGTPLLKHEYGKHLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWKKSSSGSLLKMGSHEGLLFFVSLMDGTVHYVDEKGKTTQVVSADSTIQMLFYME
KREALVVVTENLRLSLYTVPPEGKAEEVMKVKLSGKTGRRADIALIEGSLLVMAVGEAAL
RFWDIERGENYILSPDEKFGFEKGENMNCVCYCKVKGLLAAGTDRGRVAMWRKVPDFLGS
PGAEGKDRWALQTPTELQGNITQIQWGSRKNLLAVNSVISVAILSERAMSSHFHQQVAAM
QVSPSLLNVCFLSTGVAHSLRTDMHISGVFATKDAVAVWNGRQVAIFELSGAAIRSAGTF
LCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFLDICGNFLVVGTDL
AHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISILPSKADNSPDSKIC
FYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYVPVNHFWDQSEPRL
FVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLLHESFPRPATSHSL
LGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLEDCDKATRDAMLHFS
FFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREAE
QEPELEARVAVLATQLGMLEDAEQLYRKCKRHDLLNKFYQAAGRWQEALQVAEHHDRVHL
RSTYHRYAGHLEASADCSRALSYYEKSDTHRFEVPRMLSEDLPSLELYVNKMKDKTLWRW
WAQYLESQGEMDAALHYYELARDHFSLVRIHCFQGNVQKAAQIANETGNLAASYHLARQY
ESQEEVGQAVHFYTRAQAFKNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGVQ
MDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDETSDPALLARCSDFFIEHSQYE
RAVELLLAARKYQEALQLCLGQNMSITEEMAEKMTVAKDSSDLPEESRRELLEQIADCCM
RQGSYHLATKKYTQAGNKLKAMRALLKSGDTEKITFFASVSRQKEIYIMAANYLQSLDWR
KEPEIMKNIIGFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLAKAKAK
SPLDQETRLAQLQSRMALVKRFIQARRTYTEDPKESIKQCELLLEEPDLDSTIRIGDVYG
FLVEHYVRKEEYQTAYRFLEEMRRRLPLANMSYYVSPQAVDAVHRGLGLPLPRTVPEQVR
HNSMEDARELDEEVVEEADDDP
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggccctctattatgaccaccagatagaagccccggatgcagcagggtcaccctcattt
atcagctggcaccctgtccatccattcttggcagttgcttacatcagcacaacctcaaca
ggcagcgtggatatttacctggagcaaggggagtgcgtgccagatacacacgtcgagagg
ccgttccgggttgcttccctgtgctggcacccgacgcggctggtgctggctgtgggctgg
gagactggagaagtgacggtgtttaacaagcaggacaaggagcagcacacgatgcccctg
acacacacagccgacatcaccgtgctccgttggagccccagtggaaactgcctgctgtct
ggggacaggcttggtgtcttgctcttgtggaggttggaccaaaggggccgagtgcaaggg
acgcctctgctgaaacacgagtatgggaaacacctcacgcactgcatcttccggctcccc
cctcctggcgaggacctggttcagttggcaaaggcagctgtgagcggtgatgagaaagcc
ctggacatgtttaactggaagaagagcagttctggaagtttgctgaagatggggtctcac
gaggggctgttgttctttgtcagtctgatggacgggacagtgcactatgtggatgagaag
ggcaagaccactcaggtggtgtccgcagacagcacgattcagatgctgttctacatggag
aagagggaggcactggtggtggtcacagagaacctccggctgtccctgtacacggtgcct
cctgagggcaaagcagaagaagtgatgaaggtcaagctgagcgggaaaaccggccgccgg
gcagacatcgctttgattgaaggcagccttctcgtgatggccgtcggggaggctgccctc
agattctgggacatagaacgaggagagaattatatactgagtccagatgagaagtttggc
tttgagaaaggagagaatatgaactgtgtgtgttactgtaaagtcaaaggtcttctggcc
gctggtaccgacagagggcgagtagccatgtggaggaaagtaccagacttcctgggcagc
cccggggcagagggcaaggacaggtgggcccttcagacccctaccgagctccaaggaaac
atcacgcaaatccagtggggttccaggaagaacctgctggcagtgaacagcgtcatctcc
gtggccatcctcagcgagcgggccatgtcgtcacacttccaccagcaagtggccgccatg
caggtctccccgagtctgctgaatgtgtgcttcctgtccacgggggtcgcacacagcctg
cgcaccgacatgcacatcagtggagtgtttgccaccaaggatgctgtcgcagtctggaac
ggaaggcaggtggcgatcttcgagctttctggagccgcgatacggagtgcagggaccttc
ttgtgtgagacgcctgtgttagcaatgcatgaagaaaacgtttacacggtggagtcaaac
cgagttcaagttcgaacctggcaggggactgtcaaacaactcctccttttctcggagact
gaggggaatccctgcttcttggacatctgtgggaatttcctggttgtagggacagacttg
gctcactttaaaagctttgatctttcccgaagagaggccaaagcacactgtagctgcagg
agcctggcggagctggtccctggggtggggggcatcgcttctctgcggtgcagcagcagc
gggagcaccatcagcatcctccccagcaaggctgacaacagccctgattccaaaatctgc
ttctacgatgttgaaatggacacagtgaccgtctttgacttcaagactggacaaattgat
cggagagagacgctgtcctttaatgagcaagagactaataagagccacctctttgtggat
gagggactgaaaaattatgttcccgtgaaccacttctgggaccagagtgagccccggctg
tttgtatgcgaagccgtgcaggagacgccgcgctcccagcctcagtctgcaaacgggcag
ccccaagatgggcgcgctggccctgcggcagatgttttgatcctgtccttcttcatttcc
gaagagcacggcttcctgcttcatgagagcttcccccggcctgccacctcccacagtctc
ctggggatggaagtgccttattactacttcacaagaaagcccgaagaagcagacagagaa
gacgaggtggagcctgggtgccaccacatccctcagatggtgtccaggagacccctgcga
gactttgtggggctggaggactgcgacaaggccacccgggacgccatgctccacttcagc
ttctttgtcaccataggagacatggacgaagccttcaaatccatcaagctcatcaaaagt
gaggccgtctgggagaacatggcgcgcatgtgcgtgaagacccagcggctggacgtggcc
aaggtgtgcctggggaacatgggccatgcccgcggggcccgagcgctgcgtgaggcggag
caggagccggagctagaggcccgcgtggccgtgctggccacgcagctgggcatgctggag
gacgccgagcagctgtacaggaagtgcaagcgccacgacctcctgaacaagttctaccag
gctgcgggccggtggcaggaggccctccaggtagccgagcaccacgatcgcgtgcacctg
cgcagcacctaccaccgctatgccgggcacctggaggccagcgccgactgcagccgggcc
ctcagttactacgagaagtcggacacgcaccgcttcgaggtgcccaggatgctgtcggag
gacctgccgtccctggagctctacgtgaataaaatgaaggataagaccctgtggcggtgg
tgggcgcagtacctggagagccagggcgagatggacgccgcgctgcactactacgagctg
gcccgggaccacttctccctggtccgcatccactgcttccagggcaatgtccagaaggct
gcgcaaatagccaacgagacaggaaacctggcggcctcctaccacctcgcccgccagtac
gagagccaggaggaggtcgggcaggcggtgcacttctacacccgggcacaggccttcaag
aatgccatccgcctgtgcaaggagaacggcctggacgaccagctcatgaacttggccctg
ctgagctcccccgaggacatgatcgaggcggcccgatactacgaggagaagggcgtgcag
atggacagggcggtcatgctgtaccacaaggctggccacttctccaaggccctggagctg
gcctttgccacccagcagtttgtggccctacagctcatagcagaggacctggatgagacg
tcagaccctgcgctcctggcccgctgctccgacttcttcatcgagcacagtcagtacgag
agggcggtagagctgctgctggctgccaggaagtatcaggaagccctgcagctgtgcctg
gggcagaacatgagcatcaccgaggagatggcggaaaagatgaccgtggccaaggactcc
tcggacctgcctgaggagtcgcggcgggagctgctggagcagatagcagactgctgcatg
cgccagggcagctaccacctggccaccaagaagtacacgcaggccggcaacaagctgaag
gccatgagggcgctgctcaaatccggagacacggagaaaatcacgttcttcgcgagcgtg
tccaggcagaaggaaatctacatcatggctgctaactacctgcagtccctggactggcgg
aaggagccggagatcatgaagaacatcatcggcttctacaccaaggggcgggccctggac
ctcctggctggcttttatgacgcttgtgcccaggtggagattgatgaataccagaactac
gacaaagcccacggggcgctgaccgaggcctacaagtgcctggccaaggccaaggccaag
agccccctggaccaggagaccaggctggcgcagctgcagagcaggatggcactggtgaag
aggttcatccaggcccgcaggacgtacacagaggaccccaaggagtccatcaagcagtgt
gagctgctcctggaggaaccagacctggacagcaccatccgcatcggggacgtctatggc
ttcctggtggagcactacgtgcggaaggaggaataccagacggcctacagattcctggag
gagatgcggcggcggcttcccttggccaacatgtcctactacgtgagcccgcaggccgtg
gacgccgtgcaccgggggctgggtctcccactgccacgcaccgtccccgagcaggtccgc
cacaacagcatggaggacgccagggagctggacgaggaggtggtggaagaggcagatgac
gacccctga
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integrated database retrieval system
