Homo sapiens (human): 1301 Help Entry 1301              CDS       T01001                                  Symbol COL11A1, CO11A1, COLL6, DFNA37, STL2 Name (RefSeq) collagen type XI alpha 1 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism hsa  Homo sapiens (human) Pathway hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00604   Deafness, autosomal dominant H00805   Vitreoretinal degeneration H02072   Stickler syndrome H02080   Fibrochondrogenesis H02081   Marshall syndrome H02539   Intervertebral disc disease Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     1301 (COL11A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1301 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1301 (COL11A1) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1301 (COL11A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  1301 NCBI-ProteinID:  NP_001845 OMIM:  120280 HGNC:  2186 Ensembl:  ENSG00000060718 UniProt:  P12107 Q59HB5 LinkDB All DBs Position 1:complement(102876473..103108522) Genome browser AA seq 1806 aa AA seqDB search MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS PDCDSSAPKAAQAQEPQIDEYAPEDIIEYDYEYGEAEYKEAESVTEGPTVTEETIAQTEA NIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPVEEIFTEEYLTGEDYDSQRKNSEDTLY ENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG AYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR GFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK GEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEG MQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL LSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDE EMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG PVCFLG NT seq 5421 nt NT seq  +upstreamnt  +downstreamnt atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccgtaaca accctcgcattgaccttcctcttccaagctagagaggtcagaggagctgctccagttgat gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacgggattt tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca caactcagtgccccaacaaaacagttatttccaggtggaactttcccagaagacttttca atactatttacagtaaaaccaaaaaaaggaattcagtctttccttttatctatatataat gagcatggtattcagcaaattggtgttgaggttgggagatcacctgtttttctgtttgaa gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct gacgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatt cagcagtttttgatcacaggtgatcccaaggcagcatatgactactgtgagcattatagt ccagactgtgactcttcagcacccaaggctgctcaagctcaggaacctcagatagatgag tatgcaccagaggatataatcgaatatgactatgagtatggggaagcagagtataaagag gctgaaagtgtaacagagggacccactgtaactgaggagacaatagcacagacggaggca aacatcgttgatgattttcaagaatacaactatggaacaatggaaagttaccagacagaa gctcctaggcatgtttctgggacaaatgagccaaatccagttgaagaaatatttactgaa gaatatctaacgggagaggattatgattcccagaggaaaaattctgaggatacactatat gaaaacaaagaaatagacggcagggattctgatcttctggtagatggagatttaggcgaa tatgatttttatgaatataaagaatatgaagataaaccaacaagcccccctaatgaagaa tttggtccaggtgtaccagcagaaactgatattacagaaacaagcataaatggccatggt gcatatggagagaaaggacagaaaggagaaccagcagtggttgagcctggtatgcttgtc gaaggaccaccaggaccagcaggacctgcaggtattatgggtcctccaggtctacaaggc cccactggaccccctggtgaccctggcgataggggccccccaggacgtcctggcttacca ggggctgatggtctacctggtcctcctggtactatgttgatgttaccgttccgttatggt ggtgatggttccaaaggaccaaccatctctgctcaggaagctcaggctcaagctattctt cagcaggctcggattgctctgagaggcccacctggcccaatgggtctaactggaagacca ggtcctgtgggggggcctggttcatctggggccaaaggtgagagtggtgatccaggtcct cagggccctcgaggcgtccagggtccccctggtccaacgggaaaacctggaaaaaggggt cgtccaggtgcagatggaggaagaggaatgccaggagaacctggggcaaagggagatcga gggtttgatggacttccgggtctgccaggtgacaaaggtcacaggggtgaacgaggtcct caaggtcctccaggtcctcctggtgatgatggaatgaggggagaagatggagaaattgga ccaagaggtcttccaggtgaagctggcccacgaggtttgctgggtccaaggggaactcca ggagctccagggcagcctggtatggcaggtgtagatggccccccaggaccaaaagggaac atgggtccccaaggggagcctgggcctccaggtcaacaagggaatccaggacctcagggt cttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaacca ggacttgctggacttcctggtgctgatgggcctcctggtcatcctgggaaagaaggccag tctggagaaaagggggctctgggtccccctggtccacaaggtcctattggatacccgggc ccccggggagtaaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaaaag ggtgaagatggttttccaggattcaaaggtgacatgggtctaaaaggtgacagaggagaa gttggtcaaattggcccaagaggggaagatggccctgaaggacccaaaggtcgagcaggc ccaactggagacccaggtccttcaggtcaagcaggagaaaagggaaaacttggagttcca ggattaccaggatatccaggaagacaaggtccaaagggttccactggattccctgggttt ccaggtgccaatggagagaaaggtgcacggggagtagctggcaaaccaggccctcggggt cagcgtggtccaacgggtcctcgaggttcaagaggtgcaagaggtcccactgggaaacct gggccaaagggcacttcaggtggcgatggccctcctggccctccaggtgaaagaggtcct caaggacctcagggtccagttggattccctggaccaaaaggccctcctggaccacctggg aaggatgggctgccaggacaccctgggcaacgtggggagactggatttcaaggcaagacc ggccctcctgggccagggggagtggttggaccacagggaccaaccggtgagactggtcca ataggggaacgtgggcatcctggccctcctggccctcctggtgagcaaggtcttcctggt gctgcaggaaaagaaggtgcaaagggtgatccaggtcctcaaggtatctcagggaaagat ggaccagcaggattacgtggtttcccaggggaaagaggtcttcctggagctcagggtgca cctggactgaaaggaggggaaggtccccagggcccaccaggtccagttggctcaccagga gaacgtgggtcagcaggtacagctggcccaattggtttaccagggcgcccgggacctcag ggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaagggcct gcagggagagatggagttcaaggtcctgttggtctcccagggccagctggtcctgccggc tcccctggggaagacggagacaagggtgaaattggtgagccgggacaaaaaggcagcaag ggtgacaagggagaaaatggccctcccggtcccccaggtcttcaaggaccagttggtgcc cctggaattgctggaggtgatggtgaaccaggtcctagaggacagcaggggatgtttggg caaaaaggtgatgagggtgccagaggcttccctggacctcctggtccaataggtcttcag ggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatggggcca cctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaagga cccccagggtctgttggttcagttggtggtgttggagaaaagggtgaacctggagaagca gggaacccagggcctcctggggaagcaggtgtaggcggtcccaaaggagaaagaggagag aaaggggaagctggtccacctggagctgctggacctccaggtgccaaggggccaccaggt gatgatggccctaagggtaacccgggtcctgttggttttcctggagatcctggtcctcct ggggaacctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagatggagat cctggtcaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcctgga aaacgaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggtgctaag ggggaagcaggtgcagaaggtcctcctggaaaaaccggcccagtcggtcctcagggacct gcaggaaagcctggtccagaaggtcttcggggcatccctggtcctgtgggagaacaaggt ctccctggagctgcaggccaagatggaccacctggtcctatgggacctcctggcttacct ggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggcctg attggtcctccaggagaacaaggggaaaaaggtgaccgagggctccctggaactcaagga tctccaggagcaaaaggggatgggggaattcctggtcctgctggtcccttaggtccacct ggtcctccaggtttaccaggtcctcaaggcccaaagggtaacaaaggctctactggaccc gctggccagaaaggtgacagtggtcttccagggcctcctgggtctccaggtccacctggt gaagtcattcagcctttaccaatcttgtcctccaaaaaaacgagaagacatactgaaggc atgcaagcagatgcagatgataatattcttgattactcggatggaatggaagaaatattt ggttccctcaattccctgaaacaagacattgagcatatgaaatttccaatgggtactcag accaatccagcccgaacttgtaaagacctgcaactcagccatcctgacttcccagatggt gaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgtaat ttcacatctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaagaatt tcatcatggccaaaggagaaaccaggaagttggtttagtgaatttaagaggggaaaactg ctttcatacttagatgttgaaggaaattccatcaatatggtgcaaatgacattcctgaaa cttctgactgcctctgctcggcaaaatttcacctaccactgtcatcagtcagcagcctgg tatgatgtgtcatcaggaagttatgacaaagcacttcgcttcctgggatcaaatgatgag gagatgtcctatgacaataatccttttatcaaaacactgtatgatggttgtgcgtccaga aaaggctatgaaaagactgtcattgaaatcaatacaccaaaaattgatcaagtacctatt gttgatgtcatgatcaatgactttggtgatcagaatcagaagttcggatttgaagttggt cctgtttgttttcttggctaa

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