Homo sapiens (human): 5073
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Entry
5073 CDS
T01001
Symbol
PARN, DAN, DKCB6, PFBMFT4
Name
(RefSeq) poly(A)-specific ribonuclease
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03018
RNA degradation
Network
nt06510
Telomere length regulation
Element
N01475
Telomerase RNA maturation
Disease
H00507
Dyskeratosis congenita
H02569
Pulmonary fibrosis and/or bone marrow failure, telomere-related
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5073 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
5073 (PARN)
Enzymes [BR:
hsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
5073 (PARN)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
5073 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
5073
NCBI-ProteinID:
NP_002573
OMIM:
604212
HGNC:
8609
Ensembl:
ENSG00000140694
UniProt:
O95453
B3KN69
Structure
PDB
PDBj
LinkDB
All DBs
Position
16:complement(14435701..14630260)
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AA seq
639 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVKIAVNTSKYAESYRIQTYAEYMGRKQEEKQIKRKWTEDSWKEADSKRLN
PQCIPYTLQNHYYRNNSFTAPSTVGKRNLSPSQEEAGLEDGVSGEISDTELEQTDSCAEP
LSEGRKKAKKLKRMKKELSPAGSISKNSPATLFEVPDTW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
tctgcattaacaaatggttttgacactccagaagagaggtatcagaagcttaaaaagcat
tccatggactttttgctatttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacgaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcagagctccagcattgactttctagcaagccaggga
tttgattttaataaagtttttcgaaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgttcacaggcgaatggtgcaggagctctgtcc
tatgtatctcctaacacttcaaaatgtcctgtcacgattcctgaggatcaaaagaagttt
attgaccaagtggtagagaaaatagaggatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtaccgggttccaaagaaaactaatttatcagactttgagctggaag
tatccgaaaggcattcatgttgagactttagaaactgaaaagaaggagcgatatatagtt
atcagcaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgccaaagaa
caggaggagctgaatgatgctgtgggattttctagagtcattcacgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggacgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacttaagtgagtttaaagagatgacaacatgtgttttcccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcggttaaaagagacacctttcaaccctcctaaagtt
gaaagtgccgaaggttttccaagttatgacacagcctctgaacaactccacgaggcaggc
tacgatgcctacatcacagggctgtgcttcatctccatggccaattacctaggttctttt
ctcagccctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagttatttcttatgagggtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcatgttctccatgtgacattccccaaagaatggaaaaccagcgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggattgatgacacatca
gcatttgtttcccttagccagcccgagcaagtaaagattgctgtcaataccagcaaatat
gcagaaagctatcggatccaaacctatgctgaatatatggggagaaaacaggaagagaag
cagatcaaaagaaagtggactgaagatagctggaaggaggctgacagcaaacggttaaac
ccccagtgcataccctacaccctgcagaatcactattaccgcaacaatagttttacagct
cccagcacagtaggaaagagaaatttgagtcctagtcaagaggaagctggcctggaggac
ggagtgtcaggggagatttccgacactgagcttgagcagaccgattcctgtgcagagccc
ctctcagagggaaggaaaaaggccaagaaattaaaaagaatgaagaaggagctttctcca
gcaggaagcatctcgaagaacagccctgccacactctttgaagttcctgacacatggtaa
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