Herbaspirillum seropedicae SmR1: Hsero_0482
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Entry
Hsero_0482 CDS
T01268
Name
(GenBank) drug efflux lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse01501
beta-Lactam resistance
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_0482
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hsero_0482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_0482
01504 Antimicrobial resistance genes [BR:
hse01504
]
Hsero_0482
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_0482
Antimicrobial resistance genes [BR:
hse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hsero_0482
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Hsero_0482
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Hsero_0482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADJ62002
UniProt:
D8IXC7
LinkDB
All DBs
Position
complement(525480..526931)
Genome browser
AA seq
483 aa
AA seq
DB search
MANLSMPRSPRLLHMCAALVMAGVLGGCSLAPTYERPQAPVESSYPADAAGRAELQAVNL
GWRQFFPDQRLQQLIAAALENNRDLRTAVLNIEEARAQYQIARADLLPNLNLSGNAARTR
TAASQSLTGQPTISNSYQVGLAVPAYELDFFGRVRNLKDAALASYLSTEEAQKSAQISLV
AQVAQAYLAERSYAEQLKLADETLKSRQSNLDLAQKRLDVGASTALDFRLTQTLVESARV
AKTQLERQRAQAENALTLLVGKKIGELPPAQLLSDEKIVTDIPAGLPSDLLTNRPDIRSA
EQSLLAANANIGAARAAFFPRISLTGNFGSASSTLGGLFESGSGAWSFGPSLSLPIFDFG
RNSANLDLAEVRKNKAVVTYEKAIQTAFREVADALVARGSLDEQVKAQEAFLAAQQERLK
LTDLRFKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLYKALGGGLNENTVSVA
AKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgtcgatgccgcgctcgcctcgcctgctgcacatgtgcgcagcgctggtg
atggccggcgtactggggggctgctcgctggctcccacctatgagcgtccgcaagcgccg
gtagaatcgtcctacccggccgacgccgcgggccgtgccgaactgcaggccgtcaacctg
ggctggcgccagttcttcccggaccagcgtttgcagcagctcatcgcggcggcgctggaa
aacaaccgtgacctgcgcaccgccgtgctcaatatcgaggaggcgcgcgcgcaataccag
atcgcacgcgccgatctgctgcccaacctgaacctgtcgggcaatgcggcgcgcacccgc
accgccgccagccagtccctgacgggacagccgaccatcagcaacagctaccaggtcggc
ctggctgtgcctgcctacgagctggacttttttggccgcgtgcgcaacttgaaggacgcg
gcgctggccagctacctctccaccgaagaagcgcagaagtcggcgcagatcagcctggtg
gcgcaggtggcgcaagcctatctggccgaacgttcctatgccgagcagttgaagctggcc
gatgagaccctcaagtcgcgccagtccaatctcgatctggcgcagaagcgcctggacgtg
ggcgccagcaccgcgctggatttccgcctgacgcaaaccttggtggaatcggccagggtc
gccaagacccagctggagcgccagcgtgcccaggcagagaatgccctgacgctcctggtc
ggcaagaagatcggcgagctgccgccggcgcagttgctgtcagatgaaaagatcgtgacc
gacattcccgctggcctgccttcggacctgctgaccaatcgtcctgacatccgctcggcc
gagcagagcctgctggctgccaacgccaatatcggcgcggcgcgcgcggcattcttcccg
cgcatctcgctgacgggcaacttcggcagcgccagcagcacgctgggcgggctgttcgaa
agcggttctggcgcatggagctttggcccttcgctgtccttgccgattttcgattttggc
cgtaacagcgccaatctggacttggctgaagtgcgcaagaacaaggctgtcgtgacctat
gaaaaggctatccagactgcattccgcgaggttgcggatgccttggtggcgcgtggtagc
ctggatgagcaggtcaaggcgcaggaagctttcctggctgcccagcaggagcgtctcaag
ctgaccgacctgcgcttcaagaatggcatcgcctcgtcgctggatcagctcgatgcacag
cgcgacctgttctcggcgcagcaagccctgatccaggcgcgccagctgcggttgaacaat
gccattgatctgtacaaggcattgggaggcggcttgaatgaaaacacggtgagtgtggcg
gccaagcagtaa
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