Herbaspirillum seropedicae SmR1: Hsero_1359
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Entry
Hsero_1359 CDS
T01268
Symbol
tolC
Name
(GenBank) outer membrane drug efflux lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse01501
beta-Lactam resistance
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_1359 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hsero_1359 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1359 (tolC)
01504 Antimicrobial resistance genes [BR:
hse01504
]
Hsero_1359 (tolC)
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_1359 (tolC)
Antimicrobial resistance genes [BR:
hse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hsero_1359 (tolC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Hsero_1359 (tolC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Hsero_1359 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADJ62875
UniProt:
D8IP55
LinkDB
All DBs
Position
1549806..1551302
Genome browser
AA seq
498 aa
AA seq
DB search
MKPSLSTRSPVLPMMLPVMLAMLLGGCTLMPDYHRPDAPVAAHFAGADSKNAAGASSAPV
VADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSE
TASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQ
ISLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVE
SARVDVESYTAQVDQDRNALVLLVGKDLPTALLPQGLPDTRLAAASPLATIPPGLPSDLL
QRRADIVQAERDLRAANANIGAARAAFYPSITLTVNAGTASARLAGLFKGGSGSWSFVPQ
ISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEAL
VQASDEAFRLSQARYHSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG
WVERTGTPAASDIATQEP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttccctttctacccgttccccggtgctgcccatgatgttgccggtgatgctg
gccatgctgctgggtggctgcaccctgatgcctgactaccatcgtcccgacgccccggtg
gcggcgcactttgccggcgccgacagcaagaacgcagccggcgccagcagcgcgccagtg
gtggccgatatcggctggcgcgatgtcttcaccgatccttccttgcagcaggtcattgcg
ctggcgctggagaacaaccgtgacctgcgcgtggccgtgctcaacatcgagaaggcgcgc
gcccagtatggcgtgcagcgcgcggccctgttcccctccattaaggcggccaccagcgaa
acggccagtcgcacaccgggcgatctctccagcaccggcagcgccctgaccagccgcagc
tataccgctacgctgggcttcagcgcctacgagctggatctgttcggccgcgtgcgcagc
ctcaaggagcaggcgctgcaatccttcctctccactgccgaggcgcgccgcagtactcag
atcagtctgattgccgaagtggccaccgcctggctgaccctggcgtcggaccaggatcgc
ctgcgcctggcccaggacaccctggaaagccagagcagcagttacgcgctcacgcaacgc
agtttcgaactgggctcgtcctctgcactgaccctgcggcaggcccagaccagcgtggag
agcgcccgcgtggatgtggagagctataccgcccaggtcgaccaggaccgcaatgcgctg
gtgctgttggtgggcaaggacttgccgacagcgctgttgccgcagggcctgcccgatacg
cggctggctgcggccagcccgctggcgaccatcccaccgggactgccctcggacctgctg
caacggcgcgctgacatcgtgcaggccgaacgcgacctgcgcgcggccaatgccaacatc
ggcgcggcgcgcgcggccttctatcccagcatcaccctgaccgtcaatgccggtactgcc
agcgcccgtctggcgggcttgttcaaggggggatcgggatcgtggagcttcgtgccgcag
atttccctgcccatcttcgacggcggcgccaaccaggccaacctggatatcgccaccgtc
agccgcgacatctcggtggcgcaatacgagaaggccatccagaccgccttccgcgaagtc
tccgacgccctggcccagcgcaataccctgggccgccagctacaggcccaggaggcgctg
gtgcaggccagcgacgaggccttccgcttgtcgcaggcgcgctaccacagcggggtggac
agttacctcacggtgctggattcgcagcgcacgctgtactcggcgcagaagaacctgatc
ggcacccagctctcgcgctggaccaatctggtgaccttctacaagaccctcggtggcggc
tgggtggagcgtacgggaacgccggcggccagcgatattgccacgcaggagccgtga
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