Herbaspirillum seropedicae SmR1: Hsero_2044
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Entry
Hsero_2044 CDS
T01268
Name
(GenBank) outer membrane drug efflux lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse01501
beta-Lactam resistance
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_2044
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hsero_2044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_2044
01504 Antimicrobial resistance genes [BR:
hse01504
]
Hsero_2044
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_2044
Antimicrobial resistance genes [BR:
hse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hsero_2044
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Hsero_2044
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Hsero_2044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADJ63544
UniProt:
D8ISY5
LinkDB
All DBs
Position
complement(2308468..2309880)
Genome browser
AA seq
470 aa
AA seq
DB search
MKSLPMSLPVPFRLSLLLALTLLGACSPLTRSAYTPVSTQTPASWQQRGSQPEADVQRWW
QGFGDATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGASSSKQLD
GDRISTRASQSSVKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWT
GAYLNQRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQR
VENDNALAILFDQPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALA
GVDQARLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQA
DFDTAVLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSA
TLQLWLDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGGDASVPAAIIAP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactgcccatgtccctgcccgtcccattccgtctctcgctgctgctcgcgctc
acgctgctgggggcctgcagcccgctcacccgcagcgcctacacacccgtgtccacgcag
acgcccgccagctggcagcagcgcggcagccagcccgaagcggatgtgcagcgctggtgg
caaggctttggcgacgccacgctgaccgcactcatcgatgaagccctgcgcaagaacaat
gacctggccctggcggccatcaagctcaggcgcgcccaggcgcaggctggcctggccgat
gacgctttcgtgccagcgctcagcgccagcctgggagcgagcagcagcaagcagctcgat
ggcgaccgcatcagcacgcgcgccagccagagctcggtcaaactcagttatgaagtggat
ctgtggggccgcctggcagccgcctccgacctcagtcgctgggaagccctggccaccgag
caggatcgccagagcacagcgctcacactcatcggcactaccgccaatctctactggacc
ggggcctacctgaaccagcgcgtggcaacggccgagcagagcatcgcctatgcagaaaag
accctggaactggtgcgcacccaataccaggcaggagcggtgtcgtcggtggaagtgctg
tcggcgcagcagaatctctacagccagcagtcgagctataccgaactggtgcagcaacgg
gtggagaacgacaatgccctggccatcctgttcgaccagccgcccggcaaggccatcgcc
ctgccggcacggctgccggaacaagcgctgcccgtgctggccgctggcgtgccggccgaa
ctgctggggcggcggcccgacctgcgtgcgcttgaattgcgcatccgcagcgccctggcg
ggcgtggaccaggcgcgcctgaattattatccgcaactgagcctgaccggcacgctcggc
accagcagcgacgccctgctgcgcctggtacagaatcccgtggccacgctgggcggcgcg
ctgacgctgcccttcctgcagcacagcgagatgaagttcaaggtcggcatctcccaggcc
gacttcgataccgcggtgctcaacttccgcaagggtctctacaccgccttcagcgaggtc
gagaacgccctgtcggcgcgccagcagtacgcccgccagcaagcgctgctggtgcgcaac
ctggacgccgcgcaggccgccgaacgcttgctggaagtgcgctaccgggccggctcggcc
accttgcagctctggctggaccagcaggacaagcggcgcaccgctgaaatctcgctggcc
caggtgcgcctgaatcagttgaagaaccagatgacgctgtaccaggcgttaggcggagac
gccagcgtgccagcggccatcattgcgccgtga
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