Herbaspirillum seropedicae SmR1: Hsero_2879
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Entry
Hsero_2879 CDS
T01268
Symbol
tolC
Name
(GenBank) outer membrane channel lipoprotein
KO
K12340
outer membrane protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse01501
beta-Lactam resistance
hse01503
Cationic antimicrobial peptide (CAMP) resistance
hse02020
Two-component system
hse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Hsero_2879 (tolC)
09132 Signal transduction
02020 Two-component system
Hsero_2879 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hsero_2879 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
Hsero_2879 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_2879 (tolC)
02044 Secretion system [BR:
hse02044
]
Hsero_2879 (tolC)
01504 Antimicrobial resistance genes [BR:
hse01504
]
Hsero_2879 (tolC)
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_2879 (tolC)
Secretion system [BR:
hse02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Hsero_2879 (tolC)
RTX toxin transporter
Hsero_2879 (tolC)
Multiple protein transporter
Hsero_2879 (tolC)
RaxAB-RaxC type I secretion system protein
Hsero_2879 (tolC)
Antimicrobial resistance genes [BR:
hse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Hsero_2879 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Hsero_2879 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
EzrA
Motif
Other DBs
NCBI-ProteinID:
ADJ64371
UniProt:
D8IZN1
LinkDB
All DBs
Position
complement(3271086..3272540)
Genome browser
AA seq
484 aa
AA seq
DB search
MSDEAAIRKALAILLICLLAPVAPVAAADTESLRIGDPLLARPPDLITGRLLPGDDQRVE
CAASPYVAGKALSLADAIDQALCQQPQIQAAWAAIKLQAAQLGEARAGYLPTVTSGASKL
NSATQYEGGSGRRSLTTLYATLTWRLLDFGGRSANQRAADAMLQSALASHDAAVQKALAS
VVASYYEVQSSSASQQAREKSQQLARQLLETAIRREQRGVGSLPETLQARTFLAKAELEQ
ARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQNLPAWLQAARQYHPA
ILAARAQLEAAREKLQVARSEGMPTLDLSARQYANGRPNQAGNRGDRERMVGLNLTVPIF
EGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTALNSLSSSRRLLDAAQG
AVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSARLRLLANAGRMGRWAVA
GNAR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgaagcagcgatacgcaaggccctggccatcctgctgatctgtctgctggcc
ccggttgcaccggtggcggcggcggacaccgagtcgctgcgcatcggcgaccccttgctg
gcgcgcccgcccgacctgatcaccggcaggctgctgcccggcgacgaccagcgggtcgag
tgcgccgcctcgccttatgtagccggcaaggcgctgagcctggccgacgccatcgaccag
gccctgtgccagcagccgcagatccaggccgcctgggccgccatcaagctccaggccgcc
cagttgggcgaggcgcgggccggctacctgcccaccgtcaccagcggcgccagcaagctc
aatagcgccacccagtacgaaggcggcagcggccgacgttcgctcaccactctctatgcc
acgctgacctggcggctgctcgacttcggcggccgcagcgccaaccagcgcgccgccgac
gccatgttgcagtcggctctggccagccatgacgcggccgtgcaaaaggccctggccagc
gtggtcgccagctactacgaagtgcagagcagcagcgccagccagcaggcccgcgagaag
agccagcaactggcgcgccagctgctggagacggccatccggcgcgaacagcgcggcgtc
ggttccttgccggagaccttgcaggcgcgcaccttcctggccaaggccgaactggagcag
gcgcgcgccagcggtcagcataagaaggcgcaggccatgctggcggcggccatgggcctg
ttgcgcgaggcccaggatgtccccgtgctcaccctggtccccgagcaggaagaatatccg
gacgggctggagcagaacctgccggcctggttgcaggcagcgcggcaataccacccggcg
atcctggcggcgcgcgcccagctggaagcggcccgcgagaaattgcaggtggcccgctcc
gaaggcatgcccacgctggacctgagcgccagacagtacgccaacggccgccccaaccag
gccggcaaccggggcgaccgcgaacgcatggtcggtctgaacctgaccgttccgatcttc
gagggctttgcgcgggactacaaggtcggcggcgcccaggcccagatcgaagcccgcgag
gccgaactgcaagaggtgcagacccaggtgctgggcgatatcgccagtacctatgccgag
gcgatgacggcgctcaacagcctgtcctcctcgcgcaggttgctcgatgccgcgcagggc
gcggtggattcggtgcggcgcaagtacgacgcgggcgccgccgatatcgtcgagatgctc
aatgcccagacggcgttgagcgaggccgaccaggaacgcgtcaaggccatgtcggactgg
cgttcggcgcgcttgcgactgctggccaacgccggtcggatggggcgctgggcggtggcg
ggtaacgcgcgctga
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integrated database retrieval system
