Hymenobacter sediminicola: H4317_09330
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Entry
H4317_09330 CDS
T09117
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk01501
beta-Lactam resistance
hsk01503
Cationic antimicrobial peptide (CAMP) resistance
hsk02020
Two-component system
hsk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H4317_09330
09132 Signal transduction
02020 Two-component system
H4317_09330
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H4317_09330
01503 Cationic antimicrobial peptide (CAMP) resistance
H4317_09330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsk02000
]
H4317_09330
02044 Secretion system [BR:
hsk02044
]
H4317_09330
01504 Antimicrobial resistance genes [BR:
hsk01504
]
H4317_09330
Transporters [BR:
hsk02000
]
Other transporters
Pores ion channels [TC:
1
]
H4317_09330
Secretion system [BR:
hsk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H4317_09330
RTX toxin transporter
H4317_09330
Multiple protein transporter
H4317_09330
RaxAB-RaxC type I secretion system protein
H4317_09330
Antimicrobial resistance genes [BR:
hsk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
H4317_09330
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
H4317_09330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LptC
Motif
Other DBs
NCBI-ProteinID:
QNH63972
UniProt:
A0A7G7WC79
LinkDB
All DBs
Position
2209018..2210559
Genome browser
AA seq
513 aa
AA seq
DB search
MKATATPLPRTLALAGTTALLLAIAGPALAQTTPPAQPPAGALAQPAATGASFTLQSAVN
YALEHNLTVRQSQLNAELSDVTQRAGRGALLPTANLNASQTWNYGTGLDPLTNDFVSQTI
RSNNFSASTQITLFSGFQLRNAVKRNALDYQAALVDIEQARNDLSLNVASVYLQLVLSEE
LIRANQTRVNSSQQQIDRTQKLLKAGAVAESNLLDSRAQLASDELNVVTAQNQRDIARLQ
LIQLLNLDAAGAANFQIELPQLPDPDDEAAYNAEPSAIFETAQGLMPEIKAADLRVRSSQ
LGIDVARGAYLPRLTFGAGVFTGFSSSRLARVFNGDSTAVVPIPVVQYVGGQPIPTTFAV
LQPKQAIPELLPAKFSDQIKDNLGRQLQFNLNIPILNGFQARTNVQRAQVTARQAELRAE
QTRLTLRQNIQQAAADALAAQRRFTSSKRQVEALTTAYRNAEIRFNNGLLNGTEFNIAKN
NLAAAESTMIQAKYEFIFRSKVLDFYQGRPLAL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaccgctacgccactgccacggactctggctctggccggaactaccgccttg
cttctggctattgctgggcctgccctggcccagaccacgccgcccgctcagcccccggca
ggcgcgttggcgcagccagcagccacaggggcctctttcacgctacaatccgccgtgaac
tatgcgctggagcacaatctgactgtgcgccaaagccagctgaatgctgagctcagcgac
gtcacgcagcgggcggggcggggagccttgctgcccaccgccaacctcaacgccagccag
acctggaactatggtactggtctggacccactcaccaacgacttcgtaagccagaccatt
cgctccaataacttctcggccagtacgcagattacccttttttccgggtttcagctgcgc
aatgccgtcaagcgtaatgccctcgattatcaggcggcactggtggatattgagcaggcc
cgcaacgacttgtcgctgaacgtggcctcggtgtatctgcagctggtgctgtctgaggag
ctgattcgggccaaccaaacgcgcgtcaacagcagccagcagcagattgaccgcacccag
aagttgctgaaagcgggtgccgtggcggagagcaacctgctcgacagccgggcccagctg
gcatccgatgagctgaatgtggtaacggcgcagaaccagcgggatattgcgcgtttgcag
cttattcagctactcaacctggatgccgccggtgcggctaattttcagattgaattgccg
cagctgcctgacccggacgacgaagctgcctacaatgccgaaccgtccgccattttcgaa
acggcgcagggcctgatgccggaaatcaaggccgccgacctgcgcgtacgttctagccag
ctgggtattgatgttgcgcggggagcgtatctgccccgcctcacgtttggagccggtgtg
tttaccggtttctcgtcgtcgcggctggcacgggtcttcaacggcgactccacggccgtg
gtgcccattccggtggtgcaatacgtaggcgggcagcctatccccaccacgtttgccgtg
ctgcagcccaagcaggctattccggagctgctgcccgccaaattctccgaccagattaag
gacaacctgggccggcagctgcagttcaacctcaatattcctattctgaacggtttccag
gcccgcaccaatgtgcagcgggcccaggtgacggcccggcaagccgagctgcgggccgag
cagacccgtctcacgctgcgccagaacatccagcaagctgccgccgatgccttggccgcg
caacgccggttcacctcgtcgaagcggcaggtagaagctctgaccacggcttaccgcaac
gccgaaatccgttttaacaacggcctgctcaacggtacggagttcaacattgccaaaaac
aaccttgccgccgccgagtctaccatgattcaggccaaatacgagttcatcttccgcagt
aaagttctcgacttctaccagggccgtccgctggccctgtag
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