Hydrogenophaga sp. RAC07: BSY239_2187
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Entry
BSY239_2187 CDS
T04455
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr01501
beta-Lactam resistance
hyr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY239_2187
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BSY239_2187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyr02000
]
BSY239_2187
01504 Antimicrobial resistance genes [BR:
hyr01504
]
BSY239_2187
Transporters [BR:
hyr02000
]
Other transporters
Pores ion channels [TC:
1
]
BSY239_2187
Antimicrobial resistance genes [BR:
hyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BSY239_2187
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BSY239_2187
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BSY239_2187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AOF84182
LinkDB
All DBs
Position
complement(2321470..2322900)
Genome browser
AA seq
476 aa
AA seq
DB search
MSHLRFGALSLAVLALSACSFTPRYERPAAPVAATFPGQAAPVAAQGDNMAWREFVGDAR
LRDLIALALANNRDLRVATLNIEQVRAQYQIRRADQFPSVGLAAAGNRQPDGNGGIASTY
SVGLALSSWEIDFFGRLGSLKEAALAQYLASEEARHAAQTSLVAAVASTWLSLQTNDELL
ALTQRTVATRQDSLRLSQLRFDNGATSALDLRQAESLTAAAQSALAQQRRARALDLNALT
LLVGQTPPPSLLPAPPTVPEAITANNAVAVPVAPVPAAAMLRDVPAGLPSDLLTRRPDIR
QAEQQLIAANANIGAARAAFFPRISLTASAGTASSSLSGLFESGSWGFTLAPQALLPIFD
AGRNNANLGSAKAARDIAVAQYEKSIQTAFREVADALAGSATLGDQLTAQQLQATAEAER
FRLAELRYRNGVSSFLDVLDAQRSLFTTQQALAQTRLAQQQNRVALYKALGGGWTE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccttcgcttcggagccctgagcctcgcggttcttgcgctctccgcctgttcg
ttcacgcccaggtacgagcgccccgccgcacccgtggccgccaccttccccggtcaagcc
gcacccgtcgcggcccaaggcgacaacatggcctggcgcgagttcgtgggcgatgcccgc
ttgcgcgacctgatcgcgctggcgctggccaacaaccgcgacctgcgcgtggccacgctc
aacatcgagcaggtgcgtgcgcagtaccagatccgccgcgccgaccagttcccgtcggtg
ggcctggccgcagccggcaaccgccagcccgatggcaatggcggcatcgccagcacctac
agcgtgggcctggccctgagcagctgggagatcgatttcttcggacgcctcggcagtctc
aaagaggcggcgctggcccagtacctcgccagcgaagaggcgcgccacgctgcgcaaacc
agtctggtggcggccgtggccagcacctggctgagcctgcagaccaacgacgagctgctg
gccctgacccagcgcaccgtcgccacccgccaggactccttgcgactgagccagctgcgc
tttgacaacggcgccacttccgcgctggacctgcgccaggccgagtcgctcacggctgcc
gcgcagtccgcgctggcccagcagcgcagagcgcgtgcgctcgacctcaacgcgctcacg
ctgctggtgggccagacgccgccaccctcactgctgcccgcgcctcccaccgtgcccgaa
gccatcacggccaacaacgcggttgctgtgccggtggcgcccgtgcccgccgcagccatg
ctgcgcgatgtgccggcgggcctgccgtccgacctgctcacgcgccgcccggacatccgt
caggccgagcagcagctgatcgcggccaacgccaacatcggtgcggcgcgcgcggcgttc
ttcccgcgcatctcgctcaccgccagcgcgggcacggccagcagcagtctttcgggcttg
tttgaaagcggctcctggggcttcacgctcgcgccacaggcgctgttgccgatctttgat
gccgggcgcaacaacgccaacctcggctccgccaaggccgcgcgcgacatcgcggtggct
cagtacgagaaatcgatccagaccgcgttccgcgaggtggcggatgcgctggccggcagc
gccacgctgggcgaccagctcacggcccagcagctgcaggccacggccgaggccgagcgt
ttccgcctggcagaactgcgctaccgcaacggggtgtcgagtttcctggacgtgctggac
gcgcagcgttcgctgttcacgacgcagcaggcgctggcgcaaacgcggctggcgcaacag
caaaaccgggtggctttgtacaaagccctgggtggcggctggacagagtaa
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