Ideonella dechloratans: LRM40_08175
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Entry
LRM40_08175 CDS
T07737
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
idc
Ideonella dechloratans
Pathway
idc01501
beta-Lactam resistance
idc01503
Cationic antimicrobial peptide (CAMP) resistance
idc02020
Two-component system
idc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LRM40_08175
09132 Signal transduction
02020 Two-component system
LRM40_08175
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRM40_08175
01503 Cationic antimicrobial peptide (CAMP) resistance
LRM40_08175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idc02000
]
LRM40_08175
02044 Secretion system [BR:
idc02044
]
LRM40_08175
01504 Antimicrobial resistance genes [BR:
idc01504
]
LRM40_08175
Transporters [BR:
idc02000
]
Other transporters
Pores ion channels [TC:
1
]
LRM40_08175
Secretion system [BR:
idc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LRM40_08175
RTX toxin transporter
LRM40_08175
Multiple protein transporter
LRM40_08175
RaxAB-RaxC type I secretion system protein
LRM40_08175
Antimicrobial resistance genes [BR:
idc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LRM40_08175
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LRM40_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UFU11620
LinkDB
All DBs
Position
complement(1748691..1750040)
Genome browser
AA seq
449 aa
AA seq
DB search
MPTSRSLFRPSARLAPLALAALCLAGTARAQSLQELYEAARSYDATYLAARAQSEAAEYQ
AAQTYALQRPSVALTASANRDINETPYSNVTRTASTTTPVTVSAQQSLFNRPNSLTIDQA
DKTVEVAKTQLQAAEQDLIVRLSQAYFDVLGAADTLATVQANKKAISEQLASAKRNFEVG
TATITDTREAQASYDLVVAQELAADNDLRVKQLALEQLVGRTGIKPWPLAKPVALPPLMP
ADLNTWLSTAEDRSPSIAQARLALDIAKLETEKARAGHLPTLALTGSYTKGRVDIDTDPT
AHLSGTNTNKSIGVTLSVPLFSGFATQNRIQETLKLEDKAVNDLEGTRRSIAQGTRSAFL
GVQSGLAQVKAYEAAEASNKLSLEATQLGYKVGVRVNLDVLTAQTQLFNTEQQLSKARYD
VIMGDLKLRQVTGQLNESDIQRVNGLLAR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccgacttcgcgctccctgttccgcccgagtgcccgcctcgcccccctggcgctggcc
gcgctctgccttgcgggaactgcccgggcccagagcctgcaggagctctacgaagcagca
cggtcctacgacgccacctacctggcggcccgcgcccagtccgaagcagccgagtaccag
gccgcccagacctacgccctgcagcgccccagcgtcgcgctgacggcctcggccaaccgg
gacatcaacgaaaccccctacagcaatgtcacccggactgcgagcaccaccacgccggtg
acggtgtctgcgcagcaaagcctgttcaaccggcccaacagcctgaccatcgaccaggcc
gacaagacggtcgaggtggccaagacccagctgcaggccgccgagcaggacctgatcgtg
cgcctctcgcaggcgtacttcgacgtgctgggggccgcggacaccctggcgaccgtgcag
gccaacaaaaaggccatctcggagcagctggcctcggccaagcgcaatttcgaagtgggc
acggccaccatcaccgacacccgcgaggcccaggccagctacgacctggtggtggcccag
gaactggccgccgacaacgatctgcgcgtcaagcaactggccctggagcaactggtgggc
cgcacgggcatcaagccctggccgctggccaagccggtggcgctgccgccgctgatgccg
gccgacctgaacacctggctgagcaccgccgaggaccgcagcccgagcatcgcccaggcc
cgcttggcgttggacatcgccaagctggagaccgagaaggcgcgcgccggccacctgccc
acgctggcactgacaggcagctacaccaagggccgtgtggacatcgacaccgacccgacc
gcccacctgtcgggcaccaacaccaacaagagcatcggcgtgacactgtcggtgccgctg
ttcagcggcttcgccacccagaaccgcatccaggaaacgctgaagctggaagacaaggcc
gtcaacgacctcgagggaacccgccgcagcatcgcgcagggcacccgctcggccttcctg
ggcgtgcaaagtggcctggcacaggtcaaggcctacgaggcggccgaggcctcgaacaag
ctgtcgctggaagccacacagctgggctacaaggtgggtgtgcgggtcaacctggacgtg
ctgaccgcccagacccagctgttcaacaccgagcagcagctctccaaggcccgctacgac
gtgatcatgggcgacctgaagctgcgccaggtcaccggccagctcaacgaatccgacatc
cagcgcgtgaacggcctgctggcccgctga
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