Idiomarina sp. OT37-5b: C5610_09765
Help
Entry
C5610_09765 CDS
T05379
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt01501
beta-Lactam resistance
idt01503
Cationic antimicrobial peptide (CAMP) resistance
idt02020
Two-component system
idt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
C5610_09765
09132 Signal transduction
02020 Two-component system
C5610_09765
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C5610_09765
01503 Cationic antimicrobial peptide (CAMP) resistance
C5610_09765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idt02000
]
C5610_09765
02044 Secretion system [BR:
idt02044
]
C5610_09765
01504 Antimicrobial resistance genes [BR:
idt01504
]
C5610_09765
Transporters [BR:
idt02000
]
Other transporters
Pores ion channels [TC:
1
]
C5610_09765
Secretion system [BR:
idt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
C5610_09765
RTX toxin transporter
C5610_09765
Multiple protein transporter
C5610_09765
RaxAB-RaxC type I secretion system protein
C5610_09765
Antimicrobial resistance genes [BR:
idt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
C5610_09765
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
C5610_09765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
NQRA_2nd
Motif
Other DBs
NCBI-ProteinID:
AVJ56552
LinkDB
All DBs
Position
2054009..2055370
Genome browser
AA seq
453 aa
AA seq
DB search
MKKHLLSATVGLALSAVTFTSSADDLAQIYQLAVQNDPALLRAAAERDAAQKQVDIAESG
FWPQVTGSIGLSDSKADRFQPGLGVYESESNGWNAGININQSVFDWSTWKQADIADKQAY
RAEVAYRDAAQGLMLRVVNAYFGALQAQDDLDFAEAEKRAIERQLEQTKQRFSVGLTAIT
DVHEAQAQYDSAVAAEIQARNAVNIAFENIREITGQYPESLAGLQTNAFDPTKPTPEDVR
EWVTKAENGNLSLMQSMVAVDIAEQQIKLEQTGHYPTVSLNASWGTDDNETTVNGTTTDL
PRLDSRQIGLSVDVPIFSGYRTSALTEQARDNYVASSQTMVETRRTVERETRNAFYDVTA
SLSSIRAFEQAVTSAESALKATEAGFEVGTRTIVDVLNSTRNLFNARRNLAEARYGYIRQ
RLALEQAVGDLTPEDLQGINAALSEQADGTAAD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcatttactgtccgcaactgttggtttagcgctttccgcagttacttttacg
tcaagcgctgacgatttggctcaaatttatcagctggctgtacaaaatgacccagcgcta
ttgcgcgctgccgccgagcgcgatgccgcgcagaagcaggtcgacattgctgaatccggg
ttctggccacaagtaactggctctatcggattgagcgacagtaaggcggatcgctttcag
cccggcttgggcgtttacgaaagcgagtctaatggttggaacgccggaatcaacatcaat
caaagtgtgtttgactggagcacctggaaacaggccgatatcgctgacaagcaggcctat
cgtgctgaggttgcgtatcgcgatgctgcgcaaggtctgatgctacgagtcgttaatgct
tacttcggcgcattgcaggcacaagatgatcttgattttgcagaagccgaaaaacgtgcc
attgaacgccagcttgagcagaccaaacaacggttctcggttgggctaaccgccattacg
gatgttcacgaagcgcaagcccagtacgatagcgctgtggcagcagaaattcaggcgcgt
aacgcggtcaacatcgcctttgaaaatatccgcgaaattaccggccaatacccagaatca
ctagccggtctgcaaaccaatgcgtttgatccgactaaaccgactccagaagatgttcgc
gagtgggtcacaaaggctgagaacggaaaccttagcctgatgcaaagtatggttgcggta
gatattgctgaacaacaaatcaagttggagcaaaccggtcactacccaaccgtgtcactc
aacgcaagctggggcactgatgataacgaaaccacggtcaacggcacaacaaccgatctt
ccccggctggattctcgccaaattggtttaagtgttgatgtacctatcttctcaggctac
cgcaccagcgcgctgaccgagcaggcgcgtgataattacgtggccagcagccagaccatg
gtggaaactcgtcgtaccgtcgagcgtgaaacccgtaatgccttctatgatgtcaccgca
tcgctgtcgagcattcgagccttcgaacaagcggttacttccgcagagagtgctttaaag
gcaaccgaagccggctttgaagtcggaactcgtaccattgttgacgtgttgaacagcacc
cgtaacttgtttaacgcccgccgtaacttggccgaagcgcgttatggttatattcgtcag
cggctggcactggagcaagcggttggcgatctgacaccggaagacctacaaggtattaac
gcagccctgtcagagcaggctgacggcaccgctgccgactaa
DBGET
integrated database retrieval system
