Ictalurus punctatus (channel catfish): 108259272
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Entry
108259272 CDS
T04658
Name
(RefSeq) prothrombin
KO
K01313
coagulation factor II (thrombin) [EC:
3.4.21.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108259272
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108259272
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108259272
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108259272
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108259272
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.5 thrombin
108259272
Peptidases and inhibitors [BR:
ipu01002
]
Serine peptidases
Family S1: chymotrypsin family
108259272
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108259272
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
108259272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin
Kringle
Thrombin_light
Gla
Nudel
Kringle_2
UPAR_LY6
Motif
Other DBs
NCBI-GeneID:
108259272
NCBI-ProteinID:
XP_017314082
Ensembl:
ENSIPUG00000002533
UniProt:
A0A2D0Q701
LinkDB
All DBs
Position
27:5612030..5623205
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AA seq
620 aa
AA seq
DB search
MGAVPAPLLVILLLSQVFQLTLCYDVFIEGKRASQVIRVKRANTAFEEIWKKGNLERECV
EEICDHEEAREVFEANDKTTAFWNTYLACSGTTVKRNVDTIRGIRSCIDQKGLCYVNTGE
HYKGNINVTISGKPCQYWKSNFPHRITEFNTTTLNLPENLCRNPDERPGGPWCFTSDPTV
RTERCAVPKCGEKLPPTVIPVLVKDVATRYQQTNCLPGNAESYTGTLSVSLHGHTCLDWN
LPIVKALFVGKDFNPEVTLSKNYCRNPDGDLEGPWCYVKKAGNITIDYCDLELCDAPLDG
QVAEDSVRQRTVGAKKDTFFNPRSFGQGELECGERPLFEKVNKEDATEVELIKSYEKRIV
HGENAEVGSAPWQVMLYKRSPQELLCGASLISDQWILTAAHCILYPPWGKNFTIDDILVR
LGKYERAKYERGTEKIVAIDEIIIHPKYNWKENLNRDIALLHLKKPVIFTNEIHPICLPT
KNIVNILMSVGHKGRVTGWGNLKEAWTSSPLNLPAKLQQIHLPIVDQEICRKSTSIRITD
NMFCAGYSPEENKRGDSCEGDSGGPFVMKNPDDKRWYQIGIVSWGEGCDRDGKYGFYTHL
FRMRRWMRKVIEKSDSADDD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagtaccagcgcctcttcttgtcatacttcttctcagccaagtgtttcagctt
acactctgctacgatgtttttattgaagggaagagggcttctcaggttatccgagtaaag
agagcaaacacggcttttgaggagatttggaagaaagggaatctggagagggaatgtgtg
gaggagatctgtgaccatgaggaggctcgagaggtgtttgaggccaatgataaaacgact
gcattttggaacacatacttggcttgttctggcaccacggtaaagcggaatgtggatacc
atcagaggaattcgaagttgtatcgatcagaaaggtctctgctacgttaataccggtgaa
cactacaaaggtaatatcaatgtcactatctcaggaaaaccatgccagtattggaaaagc
aacttccctcacagaatcactgagttcaatacaacaacgctgaatctgccagagaactta
tgtaggaatccagatgagagacccggtgggccatggtgcttcaccagtgaccccactgtc
aggacggagagatgtgcagtaccaaaatgtggtgagaagttaccacccactgtaatccct
gtcctagtaaaggacgtggctacgcgctaccagcaaaccaactgtttaccaggcaatgcg
gagagctacactggaacgctctcagtgagtctgcatggtcacacctgcctggactggaac
cttcccatagtgaaagctttgtttgtgggtaaggatttcaacccagaggttactctatcg
aaaaattactgcaggaacccagatggagacttggagggtccatggtgctacgtgaagaag
gcaggaaacatcaccatagactactgtgatttggagctctgtgatgctcctctggatggg
caggtagcggaagatagtgttcgacaaagaactgttggagccaaaaaggacacttttttt
aaccctcgcagctttggccagggagaattagaatgtggcgagcgacccttgtttgagaaa
gtaaacaaagaagatgcaacagaagttgagctcatcaaatcctatgaaaaacgaattgta
catggggagaatgctgaagtaggaagtgcaccatggcaagtgatgctgtataagcgtagt
cctcaggagctgctgtgtggagccagtttgattagcgatcagtggatcctcactgctgcc
cactgcatcctttacccaccatggggcaagaacttcaccattgatgacattcttgtgcga
cttggaaaatatgagcgggccaagtatgagagaggcacagagaagattgtggctattgac
gaaatcatcatccatcctaagtataactggaaagagaatctgaacagagacattgctctt
ctgcacttgaagaaacctgtcatcttcaccaatgagatccaccccatctgcctgcccacc
aagaacatcgtaaacattttgatgtcagttggccacaagggtcgtgtgaccggctggggg
aacctgaaagaggcgtggacatctagccctctgaaccttccagcaaagctgcagcagatc
catttgcccatcgtggaccaagaaatctgccgaaaatccacctccatccgcattacggac
aacatgttctgtgcaggttatagccctgaagagaataaacgaggcgattcctgtgaagga
gacagtggtggcccttttgtgatgaagaatcctgatgataagcgctggtaccagattggt
atcgtttcatggggtgaaggctgcgatcgggatggaaaatatggattctacactcatttg
ttccgtatgcgccgctggatgaggaaggtcatcgagaaatcagattctgctgatgatgac
tga
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