Imperialibacter roseus: RT717_10160
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Entry
RT717_10160 CDS
T09469
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
iro
Imperialibacter roseus
Pathway
iro01501
beta-Lactam resistance
iro01503
Cationic antimicrobial peptide (CAMP) resistance
iro02020
Two-component system
iro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RT717_10160
09132 Signal transduction
02020 Two-component system
RT717_10160
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RT717_10160
01503 Cationic antimicrobial peptide (CAMP) resistance
RT717_10160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iro02000
]
RT717_10160
02044 Secretion system [BR:
iro02044
]
RT717_10160
01504 Antimicrobial resistance genes [BR:
iro01504
]
RT717_10160
Transporters [BR:
iro02000
]
Other transporters
Pores ion channels [TC:
1
]
RT717_10160
Secretion system [BR:
iro02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RT717_10160
RTX toxin transporter
RT717_10160
Multiple protein transporter
RT717_10160
RaxAB-RaxC type I secretion system protein
RT717_10160
Antimicrobial resistance genes [BR:
iro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RT717_10160
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RT717_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WOK08997
LinkDB
All DBs
Position
2436682..2438037
Genome browser
AA seq
451 aa
AA seq
DB search
MQLFLRKAHLFQKTSIRMSMLTLVLVLLNTTLSLGQSGDPLEVATLDKVVEYALAHQPNV
QQAQIDEEITDKAIKGKLADWYPQVNFTYNYQRFIDLQASVIGGNVIRFGVNNTSSAQFS
ATQAVFNRDVLLASSTASQVRSQAGLNTSRSKIDVVVNVTKAFYDALAMMQQIEVNEESI
VRLERSLKDAQSRYNSGVSDKTDYKRATILLTNAKASLKTNQELLKYKQEYLKTLMGYPL
DQNLPVQYDPLLMEQEIALDTTQEVNYADHIDFKIMQSQKNLQDANVKYSKWAFLPSVSL
FGNYNLNYQNNNFSDLYNTKYPFSFVGASLALPILQGGKRLVKIQEANLSNSRLDLGLKN
LKSNINTEYTRALASYKSNLALYQAQKDNVELAEEVYDIIQLQYQSGVKTYLEVTIAESD
LRTTRINYYNALYMVLASKMDVLKALGQINY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttttctacggaaagcacatttgtttcaaaaaacatccatcaggatgtcgatg
ctgacacttgtgttagttttattgaataccactttatcgctgggccagagtggcgacccg
ctggaggttgccacgcttgacaaggtggtggaatatgccctggctcatcagcccaatgtg
cagcaggcccagattgacgaggaaattacggacaaggccatcaaagggaagctggccgac
tggtatcctcaagtcaatttcacctataactatcaacgttttattgacttgcaagcaagt
gtaattggagggaacgtgattcggtttggggttaacaatacctcatcagcgcagttcagt
gctacccaggctgtgttcaacagagatgtgcttctggctagcagcactgcttctcaggtg
cgaagtcaggccggcctcaataccagccgcagtaagattgatgtggtggtgaatgtaacc
aaagctttttatgacgcattggccatgatgcagcagattgaggtaaacgaggaatcgatc
gttagactggagcgcagcctgaaggatgcccaaagccggtataattcgggtgtgtcggat
aaaacggattataaaagagccactattttgctgaccaacgccaaagcttctttgaagacg
aatcaggagctgcttaagtacaagcaagagtacctgaaaacgctgatgggctatccgctt
gatcagaaccttccggtgcaatatgatccgcttttgatggaacaggaaatagctctcgat
acaacccaggaggtgaactacgctgatcatatcgattttaagattatgcagtcacagaaa
aaccttcaggacgccaacgtgaagtacagcaaatgggcttttttgccttctgttagcctg
tttggtaactataatcttaactatcaaaacaataacttcagcgatttgtacaacacaaag
tatccattttcttttgttggggcttcgctggcgctgccaatcttacaaggaggtaagagg
ttagtgaaaattcaggaggctaatttgtcgaacagtcgattagaccttggactgaaaaac
ctgaagagtaatatcaatactgagtacaccagggcactggcgtcctacaaaagcaatctg
gcactctatcaggcacaaaaggacaatgttgaacttgctgaggaagtctatgacatcatt
cagcttcaatatcaaagtggtgtaaaaacctaccttgaagtcacgatcgcagagagtgac
ctgagaacaacccgtatcaattattacaatgccctgtacatggtgcttgccagcaaaatg
gatgtgctgaaagccctgggccaaatcaattattaa
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