Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965342
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Entry
101965342 CDS
T10664
Symbol
Scp2
Name
(RefSeq) sterol carrier protein 2 isoform X1
KO
K08764
sterol carrier protein 2 [EC:
2.3.1.176
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00120
Primary bile acid biosynthesis
iti01040
Biosynthesis of unsaturated fatty acids
iti01100
Metabolic pathways
iti01212
Fatty acid metabolism
iti03320
PPAR signaling pathway
iti04146
Peroxisome
Module
iti_M00861
beta-Oxidation, peroxisome, VLCFA
iti_M00862
beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09103 Lipid metabolism
00120 Primary bile acid biosynthesis
101965342 (Scp2)
01040 Biosynthesis of unsaturated fatty acids
101965342 (Scp2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101965342 (Scp2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
101965342 (Scp2)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.176 propanoyl-CoA C-acyltransferase
101965342 (Scp2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_C_1
SCP2
Thiolase_N
Thiolase_C
Alkyl_sulf_C
ketoacyl-synt
ACP_syn_III
Ketoacyl-synt_C
SpoVAD
SCP2_2
Motif
Other DBs
NCBI-GeneID:
101965342
NCBI-ProteinID:
XP_005326109
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MLSRACKSPPQRRVFVVGVGMTKFVKPGVENSRDYPDLAKEAGQKALADAQIPYSAVEQA
CVGYVYGDSTCGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMARQLIQGGMADCALALG
FEKMYKRGLETKFSDRTNPVDKHFEVLVNKYGISAHPIVPQLFGSAGKEHMEKYGTKTEH
FAKIGWKNHKHSVNNPYSQFQDEYSLDEVMASRSIFEFLTVLQCCPTSDGAAAAILASEE
FVQKYGLQSKAVEILAQEMVTDLPSTFDEESVIKVVGYDMSKEAARKCYEKSGLRPNDID
VIELHDCFSVNELLTYEALGLCPEGKGGILVDRGDNTYGGKWVINPSGGLISKGHPLGAT
GLAQCAELCWQLRGEAGKRQVPGAKVALQHNLGLGGAVVVTLYKMGFPEAARTHQIEAAP
TSAASDGFKADLVFKEIEKKLEEDGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKG
SVLPNSDKKADCTITMADSDLLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPG
KAKL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcgcgcatgcaagtctccgccccagcgccgggtgtttgtagtgggggttggc
atgaccaagtttgtgaagcctggagttgagaattcaagagattaccctgacttggcaaaa
gaagcaggccagaaggcgttagctgatgcgcagatcccctactcggcagtggagcaggcg
tgcgttggctatgtttatggtgattctacctgtgggcagagggccatctatcatagtttg
ggattgactggaattcctataatcaatgttaacaataactgttccactggttctactgct
ttgtttatggcccggcaactgattcagggaggtatggcagattgtgccttggctcttggc
tttgagaagatgtataagagaggtcttgaaacaaaattttcagataggaccaatccagtt
gataaacattttgaagtcttggtcaataagtatggaatttctgcccacccaattgttcct
cagctgtttggttctgctggaaaagaacacatggaaaaatatggaacaaaaactgaacac
tttgcaaaaattggatggaaaaatcataaacattcagttaataacccgtattcccaattt
caagatgaatacagtttagatgaagtgatggcatctcgaagcatttttgagtttttgact
gtcttacaatgttgtcccacttcagatggtgctgcagcagcaattttggccagtgaagaa
tttgtacagaagtatggactgcaatccaaagctgtggaaattttggcacaggagatggtg
accgatttgccaagtacatttgatgaagaaagtgttattaaagtggttggctatgatatg
agtaaagaagctgccagaaaatgctatgagaaatctggcctgagaccaaatgatattgat
gtaattgaacttcatgattgcttttctgtgaatgagctccttacttatgaagcactggga
ctctgtccagaagggaaaggtggaatactggtcgatagaggagataacacttatggagga
aagtgggtcataaatcctagtggtggattgatttcaaaaggacatccactgggagctaca
ggtctggctcagtgtgccgaactctgctggcagctgagaggggaagccgggaagaggcaa
gttcctggtgcaaaggttgctctgcagcataatttaggcctcggaggagcagtggtggtc
acgctctataagatggggtttccggaagccgccaggacacatcaaattgaggctgctccc
accagtgctgcaagtgatggatttaaggcagatcttgtctttaaggagatcgagaagaag
cttgaagaggatggggaacagtttgtgaagaaaattggtggtatttttgccttcaaggtg
aaggatggtcctgggggtaaagaagccacctgggtggtggatgtgaagaatggcaaagga
tcagtgcttcccaactcagataagaaggctgactgcacaatcaccatggctgactcggac
ttactggctttaatgactggtaaaatgaatcctcagtcggccttctttcaaggcaaattg
aaaatcactggcaacatggggctggcaatgaagttacaaaatcttcaacttcaaccaggc
aaagctaagctgtga
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