Janthinobacterium svalbardensis: CNX70_20620
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Entry
CNX70_20620 CDS
T05119
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv01501
beta-Lactam resistance
jsv02024
Quorum sensing
Module
jsv_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNX70_20620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CNX70_20620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jsv02000
]
CNX70_20620
01504 Antimicrobial resistance genes [BR:
jsv01504
]
CNX70_20620
Transporters [BR:
jsv02000
]
Other transporters
Pores ion channels [TC:
1
]
CNX70_20620
Antimicrobial resistance genes [BR:
jsv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CNX70_20620
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CNX70_20620
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CNX70_20620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ATD62276
UniProt:
A0A290X094
LinkDB
All DBs
Position
complement(4660711..4662135)
Genome browser
AA seq
474 aa
AA seq
DB search
MKQVKPIVSTVPARHLLALAAAAVLLAGCAVSPAYETPTAVAPQTFKEAAGWQPAAPADT
LERGPWWTLFGDAQLNQLADSIEISNQNVAAAIASYEQARALVREQRASLFPTVNLTGSG
ARSGGGGEQQTNNNFKAAIGASWEPDIWGRLRAGVTGADASAAASAADLAAARLSAQGEL
AINYFSLRQSDAQIALLNSTIDGYKRVLDITSNRFNSGIAARSDLLQAQTQLANAQIDLS
SQTRARAQLEHAIAILLGKAPSDFSLAVAPWTLTVPEVPLGVPSTLLQRRPDIAAAERRV
AVANEQIGIARSAYYPSLNLTGSYGSGASRVGDLFNASSSLWSLGVSAAQTLFNAGATSA
SVDAARAGHEAAVARYRQTVLSAFGAVEDQLSATRALAEQLALRQQASSAADQVEQQMLN
RYNAGQVGYTDVVTAQVTALSARRSLVQAQADRQTTAVALIQSLGGGWHVPQAQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagtaaaacctatcgtatcgaccgtccccgcacgccacctgctggcattggcg
gcggccgcagttctcctggccggctgcgccgtcagtcccgcgtatgaaacgccgacggcc
gtcgcgccgcaaacgttcaaggaggcggccggctggcagcctgccgcgccggccgacacg
ctggagcgcggtccctggtggaccctgttcggcgacgcgcagctgaatcagctggccgac
agcatcgagatatcgaaccagaatgtggccgctgccatcgcctcgtacgagcaggcgcgc
gcgctggtgcgcgaacagcgcgcctcgctgttcccgaccgtgaacctgacgggcagcggc
gcccgctccggcggcgggggcgagcagcagacgaacaacaacttcaaggccgccatcggc
gcctcgtgggaaccggacatctggggccgcctgcgcgccggcgtgacgggggcggacgcc
agcgccgccgccagcgcggccgacctggcagcggcgcgcctgtcggcgcagggcgaactg
gccatcaattatttttcgctgcgccagagcgatgcgcagatcgcgctgctcaattcgacc
atagacggctacaagcgcgtgctcgacatcaccagcaaccgctttaactcgggcatcgcc
gccaggtccgacctgctgcaggcgcagacgcagctggccaatgcgcagatcgatctgtcc
agccagacgcgcgcccgcgcgcagctggaacacgcgatcgccatcctgttggggaaggcg
ccgtccgacttcagcctggccgtggcgccgtggaccctgaccgtgcccgaggtgccgctg
ggcgtgccgtcgaccctgctgcagcgccgtcccgacatcgcggccgccgagcgcagggtg
gccgtggccaacgagcagatcggcatcgcccgctccgcctactatcccagcctgaacctg
acgggttcctacggttccggcgccagccgtgtgggcgacctgttcaatgcatcgtcgagc
ctgtggtcgctgggcgtgtcggccgcgcaaacgctgttcaacgcgggcgccacctcggcc
agcgtggacgcggccagagcggggcatgaggcggccgtggcgcgctaccgccagacggta
ttgagtgcctttggcgccgtggaagaccagttgtcggccacgcgcgcgctggccgagcag
ctggccttgcgccagcaggcgtcgtccgccgccgaccaggtggagcagcagatgctgaac
cgctacaacgcgggccaggtcggctatacggacgtggtgacggcgcaagtgacggcgttg
tcggcgcgccgttcgctggtgcaggcgcaggcggaccgccagacgacggccgtggccctg
atccagtcgctgggcggcggctggcatgtgccgcaggcgcagtaa
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