Dokdonia sp. 4H-3-7-5: Krodi_0807
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Entry
Krodi_0807 CDS
T01484
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi01501
beta-Lactam resistance
kdi01503
Cationic antimicrobial peptide (CAMP) resistance
kdi02020
Two-component system
kdi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Krodi_0807
09132 Signal transduction
02020 Two-component system
Krodi_0807
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Krodi_0807
01503 Cationic antimicrobial peptide (CAMP) resistance
Krodi_0807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kdi02000
]
Krodi_0807
02044 Secretion system [BR:
kdi02044
]
Krodi_0807
01504 Antimicrobial resistance genes [BR:
kdi01504
]
Krodi_0807
Transporters [BR:
kdi02000
]
Other transporters
Pores ion channels [TC:
1
]
Krodi_0807
Secretion system [BR:
kdi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Krodi_0807
RTX toxin transporter
Krodi_0807
Multiple protein transporter
Krodi_0807
RaxAB-RaxC type I secretion system protein
Krodi_0807
Antimicrobial resistance genes [BR:
kdi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Krodi_0807
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Krodi_0807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEE18791
LinkDB
All DBs
Position
complement(920395..921735)
Genome browser
AA seq
446 aa
AA seq
DB search
MIQRLSIAILLLVSVATIAQTRSFTVEEAVTFALDSNYTAINSRRDIAKAIKKKWETTAS
GLPQVSASLDYNYQIKQPTQLIPAEFTGGEPGTFIPVVFGTQQNATATATLSQLIFDGSY
LVGLQAAKTFLEFSKNANEKTQLEVRKGVINAYGGVLLAEESVAILDKNIATLEDNLRET
RIIFKNGFAEEEDVEQLQITFLSLQNQRANAKRMVTIAKQMFNLAIGIDVNEETVLTQTL
EGLALPALGLLNDTVNLEQNVDYKIANNLNEQRELELKLEKSKALPTLGAFINVGTFAGR
NEFNFFDSDEKWFPQSITGFQLNIPIFSSGMRNARTAQAAIALDQAKTQKEETEQQIKLA
YASAKSDHELAIDNYNTSLKNITLAERIENKNQVKFREGLSTSFDLRQAQTQLYQVQQEL
LQAMLQIITTKADLETILNVPNYTNN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatacagagattatcgatagcgatattattactagtaagtgttgcaacaatagcacaa
actagaagttttaccgtagaagaggctgtaacctttgctttagatagcaattatacagct
attaatagccgccgagacatcgcgaaggcaattaagaaaaaatgggaaactaccgccagt
ggattaccacaggtaagcgcaagcttagattataactaccagataaaacagcctacacag
cttattccagcagaatttacgggtggtgagcctgggacatttattcctgtagtttttgga
acacaacagaatgctactgcaacggcaacattaagtcagcttatttttgatggttcatac
cttgtaggattacaagctgccaaaacatttcttgagttttctaaaaatgcaaacgagaaa
acgcagctagaagttcgtaagggtgtaataaatgcatacggaggagtactacttgcagag
gaaagcgtggcaatattagataagaatattgcgacattagaagacaacctcagggaaact
agaatcatttttaaaaatggatttgcagaggaggaggatgtggagcaactacagattacg
tttttatcacttcagaatcaacgagcaaatgcaaagcgtatggtaaccattgctaagcaa
atgtttaacctagcaatagggattgatgtaaatgaagaaacggtgctcacgcaaacccta
gaaggactagcattacctgcattaggacttcttaatgatacggtaaacttagagcaaaat
gtagattacaagattgcaaataatcttaatgaacaacgtgagctcgaacttaaacttgaa
aaaagtaaagcgctgcctacactaggtgcttttataaatgtaggaacatttgcagggcgt
aacgagtttaacttctttgatagtgacgagaagtggtttccgcaatctattaccggtttc
caactgaacattccaattttcagttctggtatgcgtaatgcaagaactgcgcaagcggca
atagcgctagatcaagccaaaactcaaaaagaggagacagaacagcaaattaaacttgca
tatgcatctgccaaaagtgatcatgagcttgccatagataactacaatacatctcttaag
aatatcacgctagcagagcgtatcgagaataaaaatcaagtaaaatttagagaaggctta
agtactagttttgatttgagacaagctcagacacagctttatcaagtgcaacaggagttg
ctacaagcaatgttgcaaataatcacaacaaaggcagatcttgagaccatacttaatgtg
cctaattataccaataactag
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