Lysobacter antibioticus 76: LA76x_5139
Help
Entry
LA76x_5139 CDS
T04154
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lab
Lysobacter antibioticus 76
Pathway
lab01501
beta-Lactam resistance
lab02024
Quorum sensing
Module
lab_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA76x_5139
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA76x_5139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lab02000
]
LA76x_5139
01504 Antimicrobial resistance genes [BR:
lab01504
]
LA76x_5139
Transporters [BR:
lab02000
]
Other transporters
Pores ion channels [TC:
1
]
LA76x_5139
Antimicrobial resistance genes [BR:
lab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LA76x_5139
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LA76x_5139
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LA76x_5139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6204
Motif
Other DBs
NCBI-ProteinID:
ALN83241
UniProt:
A0A0S2FI37
LinkDB
All DBs
Position
complement(5852880..5854271)
Genome browser
AA seq
463 aa
AA seq
DB search
MRAAPIVWRIAAIALAMCTLAACVSVAPPPSFAEPPPAWRDAPGVGVAVQRDWWRGYNDP
VLSELVERALADNTDLRLAAARVAEARALLDAQGAVQWPTLDLSLSAQRARSVGAATGRA
NLSSVTQPQFQAAYEVDLWGRLDALTDAARANLLASETAADSVRLSVAAAVASAYLGLRA
SDARLEVAQRTLASRAGARKVAQRRFDTGYSSRLELSQAEAEYRATAQIVPQLQLAIRRQ
EDALSVLLGRAPEAVPRGRALTEIAAPALPSAGVPSQLLRRRPDIAQGEAQIAAADANLA
AARAQLLPSLRLTGTLGSLESSLLHGDPIRLWSVGGSVLAPLFNAGRLRAQVQAGAARRD
QAVLGYRKTVLTAFAEVEDAMAAIRYLDEQRDQAEHQRIALSEALRIAHNRYNEGYASYL
EELDAQRNLFNAELTVVQLQADALTAEVNLYKALGGGWEGLER
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggccccgatcgtctggcgcatcgccgcgatcgccttggcgatgtgtacgctc
gcggcctgcgtgagcgtcgcgccgccgccgagcttcgccgaaccgccgccggcctggcgc
gatgcgccgggcgtcggcgtcgccgtgcaacgcgattggtggcgcggctacaacgacccg
gtgctaagcgagctggtcgaacgcgcgctcgccgacaacaccgatctgcgcctggccgcg
gcacgcgtcgccgaggcgcgcgccctgctcgatgcgcaaggcgcggtgcaatggccgact
ctggatctgtcgctgagcgcgcaacgcgcacgcagcgtcggcgccgcgaccggccgcgcc
aacctgtcgagcgtgacccagccgcagttccaggccgcctacgaggtcgacctgtggggc
cgcctggacgcgctgaccgatgccgcccgcgccaacctgctcgccagcgaaaccgccgcc
gacagcgtacggctcagcgtcgccgcggcggtggcctcggcctatctgggcttgcgtgcg
agcgatgcgcggctcgaggtcgcacagcgcacgctggcctcgcgcgccggcgcgcgtaaa
gtcgcccagcgccgtttcgacaccggttacagctcgcgcctggaactgagccaggccgag
gccgagtaccgcgccaccgctcagatcgtgccgcaattgcagctcgcgatccggcgccaa
gaggatgccttgtcggtgttgctcggccgcgcacccgaagcggtgccgcgcggccgcgcg
ctgaccgagatcgccgcgccggcgttaccgtcggccggcgtgccttcgcaactgctgcgg
cgccgtcccgacatcgcccagggcgaggcgcagatcgccgcggccgacgccaacctggcg
gcggcgcgcgcgcagctgttgccgtcgttgcgcctgaccggcacgctcggcagcctcgaa
tcgagcctgctgcatggcgacccgatccggctgtggagcgtcggcggcagcgtgctggcg
ccgctgttcaacgcaggccgcctgcgcgcgcaggtccaggccggcgccgcgcgtcgcgac
caggccgtgctcggctaccgcaagaccgtgctgaccgcgttcgccgaagtcgaggacgcc
atggcggcgatccgttatctggacgaacagcgcgaccaggccgagcaccagcgaatcgcg
ttgagcgaagcgctgcgcatcgcccacaaccgctacaacgagggttatgcctcgtacctg
gaagaactcgacgcgcaacgcaacctgttcaacgccgagctgacggtcgtgcaactgcag
gcagacgcgttgaccgccgaggtcaacctgtacaaggcgctgggcggcggctgggagggc
ctggagcggtaa
DBGET
integrated database retrieval system
