Lacinutrix sp. 5H-3-7-4: Lacal_0882
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Entry
Lacal_0882 CDS
T01533
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan01501
beta-Lactam resistance
lan02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lacal_0882
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lacal_0882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lan02000
]
Lacal_0882
01504 Antimicrobial resistance genes [BR:
lan01504
]
Lacal_0882
Transporters [BR:
lan02000
]
Other transporters
Pores ion channels [TC:
1
]
Lacal_0882
Antimicrobial resistance genes [BR:
lan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lacal_0882
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Lacal_0882
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Lacal_0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HEPN_SAV2148
Motif
Other DBs
NCBI-ProteinID:
AEH00730
LinkDB
All DBs
Position
complement(1020473..1021891)
Genome browser
AA seq
472 aa
AA seq
DB search
MKSIIKHRNLSKGALILVVALTLQSCFVAQDYVRPDVNAETEALYRTDNLPTDSVSIADV
SWKNLFTDQYLQQYIEEGLQNNMDVRIALQQILAAQAYAKQGKAGYLPSVSVGANATHQE
LSENSQFGALFSGAIDTYDITANLSWEADIWGKIRSNKRATQAAYLQSVAGHQAVKTQLV
SSIANTYYNLLALDAQLEVTKQTIITRDSSVTTIKALKDAGQVTQVAVDQNIAQYNSAKA
LQVDIEVAIFKTENTLSILLGKTPQTFERSSLDIQNIDQNIVLGVPATLLSNRPDVMAAE
YGLINSFELTNVARSNFYPSLTLTASGGFQSLELDKLLNANSLFATIIGGLTQPIFNQRK
IKTQKEVALAQQEQALLEFKKTLLVAGSEVSNALYTYKAETKKFEFRKNEVEALRTAEAN
SNELLKNGYANYLDLLTARESALNAELNIIDSQLQQLVSIVDLYEALGGGWR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaataataaaacatagaaaccttagtaaaggcgcattaatattagttgtagca
ttaacactacaaagttgttttgtagctcaagattatgtgagaccagatgtaaatgctgaa
acagaagcactttacagaaccgataatttaccaacagatagcgtctctattgcagatgtc
tcttggaaaaatttatttacagaccaataccttcagcaatacatagaagaaggtttgcaa
aataatatggatgtacgtatagctttgcagcaaattttagcagcacaagcttatgcgaaa
caaggtaaagcaggttatttaccatctgtaagcgttggtgcaaatgcaacgcatcaggaa
ttatcagaaaacagtcaatttggagctttatttagtggcgctattgatacctatgatatt
acagcaaacttatcttgggaagcagatatttggggaaaaattagaagtaacaaacgtgca
acacaagctgcttatttacaaagcgtcgcaggacatcaagcagtaaaaacgcaactggta
tctagcattgcgaatacatactataatttattagctttagatgcgcaattagaagtaacc
aaacaaactattataactagagatagtagtgttactacaataaaagctttaaaagacgct
ggacaagtaacacaagttgctgtagaccaaaatatcgcacagtacaatagtgctaaagct
ttacaggtagatattgaagtcgctatttttaaaacagaaaatacgctaagcattttatta
ggtaaaacaccacaaacgtttgaaagaagcagtttagacattcaaaatatagatcaaaat
atcgtattgggtgttcctgctactttattaagcaacagaccagatgttatggctgcagaa
tatggtttaattaattcatttgagttaacaaatgttgcgagaagtaatttttatccgtcg
ttaactttaacagcttcaggcggatttcagagtttggaattggataaattattaaatgca
aattcattatttgctaccattattggcggattaacgcaaccaatttttaatcaaagaaaa
attaaaacacaaaaagaagttgcgcttgcacaacaagagcaagctttgcttgagtttaaa
aagactttgttagtcgcaggaagtgaagtgtctaatgcgttatatacatataaagctgaa
actaaaaagtttgaatttagaaaaaatgaagtggaagcgttacgtacagccgaagctaat
tctaacgagttacttaaaaatggttacgctaattacttagacttattaacagcaagagaa
agcgctttaaatgccgaacttaatattatagatagtcaattacaacaattagtttctatt
gtagatttatatgaagcgcttggtggtggatggagataa
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