Lemur catta (Ring-tailed lemur): 123641886
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Entry
123641886 CDS
T08326
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03320
PPAR signaling pathway
lcat04657
IL-17 signaling pathway
lcat04926
Relaxin signaling pathway
lcat05171
Coronavirus disease - COVID-19
lcat05200
Pathways in cancer
lcat05219
Bladder cancer
lcat05323
Rheumatoid arthritis
lcat05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
123641886 (MMP1)
09152 Endocrine system
03320 PPAR signaling pathway
123641886 (MMP1)
04926 Relaxin signaling pathway
123641886 (MMP1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123641886 (MMP1)
09162 Cancer: specific types
05219 Bladder cancer
123641886 (MMP1)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
123641886 (MMP1)
09163 Immune disease
05323 Rheumatoid arthritis
123641886 (MMP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123641886 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcat01002
]
123641886 (MMP1)
Enzymes [BR:
lcat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
123641886 (MMP1)
Peptidases and inhibitors [BR:
lcat01002
]
Metallo peptidases
Family M10
123641886 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Peptidase_M54
Peptidase_M66
Myb_DNA-bind_6
Metallopep
Motif
Other DBs
NCBI-GeneID:
123641886
NCBI-ProteinID:
XP_045412773
LinkDB
All DBs
Position
7:34781048..34788907
Genome browser
AA seq
468 aa
AA seq
DB search
MPSFSLLLLLLWGLGSHGFPAIPETQEQDVEIVQKYLENYYDLKNVGKQIEKKRSSGSVV
EKLKQMQEFFGLKVTGKPDTETLKVMKQPRCGVPDVARFVLTQGNPRWEQTHLTYRIENY
TPDLPRADVDLAIEKAFQLWSNASPLTFTKVFEGQADIMISFVRGDHQDNSPFDGPGGNL
AHAFQPGPGIGGDAHFDEDEQWTSDSRNYNLYRVAAHELGHSLGLSHSTDIGALMYPTYT
FSGDVQLAQDDIDGIQAIYGPSQNPNQPTGPQTPQVCDSKLTFDAITTIRGEVMFFKDRF
YMRTNPFYPEVELNFISVFWPQLPSGLEAAYEVASRDEVRFFKGNKYWAVQGQNVLPGYP
KDIYRSFGFPRTVKHIDAAISEEDTGKTYFFVANKYWRYDEYKQSMDTGYPKKLALDFPG
IGHKIDAVFKKDGFFYFFHGTRQYKFDPKTKRILTLLKANSWFNCRKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcttttctctgctgttgctactgctctggggcctggggtctcatggcttccca
gcaattccagaaacacaagagcaagatgtggagatagtccagaaatacctggaaaactac
tacgacttgaagaatgttgggaagcaaattgaaaagaagagaagcagtggctccgtggtt
gaaaaattgaagcaaatgcaggaattctttgggctaaaggtgactgggaagccagacact
gagaccctgaaggtgatgaaacagcccagatgcggggtgcctgatgtggcacggtttgtc
ctcactcaggggaatcctcgttgggagcaaacacatctgacctacaggattgaaaattac
acaccagatttgccaagggcagatgtggaccttgccattgagaaagcctttcaactctgg
agtaatgcctcacccctgacgttcaccaaggtgtttgagggccaagcagacatcatgata
tcctttgtcaggggagatcatcaggataattctccctttgatggacctggaggaaacctt
gctcatgcttttcagccaggcccaggtattggaggggatgctcattttgatgaagacgaa
cagtggaccagcgattccagaaattacaacttgtatcgtgttgcggctcatgaattgggg
cattcccttggactctctcattctactgatattggggctttgatgtaccccacctacaca
ttcagtggtgatgttcagctagctcaggatgacattgatggcatccaagccatatatgga
ccttcccaaaatcccaaccaaccaacaggcccacaaactccccaagtatgtgatagtaag
ctaaccttcgatgctataactacgattcggggagaagtgatgttctttaaagacagattc
tacatgcgcacaaatcccttctacccagaagttgagctcaatttcatttctgttttctgg
ccacaactgccaagtggacttgaagctgcttacgaagttgccagtagagatgaagtccgg
tttttcaaaggtaataagtactgggctgttcaggggcagaatgtgctacctggatacccc
aaggacatctacagatcctttggcttccctagaactgtgaagcatatcgatgctgctatt
tctgaggaagatactggaaaaacatacttctttgttgctaacaaatactggaggtatgat
gaatataaacaatccatggacacaggttatcccaaaaagctagcacttgactttcctgga
attggccacaaaattgatgctgttttcaagaaagatggattcttctatttctttcacgga
acaaggcaatacaaatttgatcctaaaacaaagagaattttgactctcctgaaagctaat
agctggttcaactgcagaaaaaaatga
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