Leptothrix cholodnii: Lcho_2439
Help
Entry
Lcho_2439 CDS
T00681
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
lch
Leptothrix cholodnii
Pathway
lch01501
beta-Lactam resistance
lch01503
Cationic antimicrobial peptide (CAMP) resistance
lch02020
Two-component system
lch03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Lcho_2439
09132 Signal transduction
02020 Two-component system
Lcho_2439
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_2439
01503 Cationic antimicrobial peptide (CAMP) resistance
Lcho_2439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2439
02044 Secretion system [BR:
lch02044
]
Lcho_2439
01504 Antimicrobial resistance genes [BR:
lch01504
]
Lcho_2439
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_2439
Secretion system [BR:
lch02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Lcho_2439
RTX toxin transporter
Lcho_2439
Multiple protein transporter
Lcho_2439
RaxAB-RaxC type I secretion system protein
Lcho_2439
Antimicrobial resistance genes [BR:
lch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Lcho_2439
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Lcho_2439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACB34704
UniProt:
B1Y5J2
LinkDB
All DBs
Position
2647556..2648887
Genome browser
AA seq
443 aa
AA seq
DB search
MKLSTARKPLLVSVLAALAALAVPAHAQSLRELYDAARSYDAGYLAAQAQAQATQFRAAQ
SESLLRPNVGLSAGAAQSVSDTPLAGTRNLTAATVGVSAVQPLINRANSAAVDQARKSLE
VVEADLASAEQDLMVRVAQAYFDVLGAVDTLATAQANKTAISEQLASAKRNFEVGTATIT
DTREAQARFDLASAQEIAADNDLRTKRIALDQLIGKTGIEPTPLAQPVVLPNLASDDVEG
WVAKTADAPLVRKARVGYEIAKLETRRADAGHSPTLDLEGSMGSAHNSGSAAVSSGGKGV
SSNARIGLTLRMPLYSGGAIDNRVKETVALEEKSRNDLDTARRAVAQATRQVYFGVQSGQ
AQVLAFEAAESSSKLALEATQTGYRVGVRVNLDVLNAQTQLYSTQRDLAKARYDVLVNGL
RLRQAAGVLSVGDLDTINGLLGR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctcgaccgcgcgcaagcccctgctggtgtccgtgctggcggccttggccgcc
ctggccgtgcccgcacatgcgcaaagcctgcgcgagctctacgacgctgcccgcagctac
gacgccggctacctggccgcgcaggcgcaggcccaggcgacgcagttccgcgccgcgcag
tccgagtcgctgctgcgccccaacgtcggcctgagcgccggcgcggcgcagtcggtcagc
gacacgccgctggccggcacccgcaacctgaccgccgcgacggtgggcgtgagcgccgtc
cagccgctcatcaaccgcgccaattcggcagcggtcgaccaggcccgcaagtcgctcgaa
gtggtcgaggccgacctcgccagcgccgagcaggacctgatggtgcgggtggcgcaggcc
tatttcgacgtgctcggcgcggtcgacacgctcgccaccgcgcaggccaacaagaccgcg
atcagcgagcagctggcgtcggccaagcgcaatttcgaggtcggcaccgccaccatcacc
gacacgcgcgaggcgcaggcgcgcttcgacctcgccagcgcacaggagatcgccgccgac
aacgacctgcgcaccaagcgcatcgcgctcgaccagctgatcggcaagaccggcatcgag
cccacgccactggcccagccggtggtactgcccaacctggccagcgacgacgtcgaaggc
tgggtcgccaagaccgccgacgcgccgctggtgcgcaaggcccgggtcggctacgagatc
gccaagctcgaaacccgccgcgccgacgccggccacagcccgacgctcgacctcgaaggc
tcgatgggcagcgcccacaactcgggctcggcggcggtgtcgtcgggcggcaagggcgtg
tccagcaacgcccggatcggcctgacgctgcgcatgccgctctacagcggcggcgcgatc
gacaaccgcgtcaaggaaaccgtggcgctcgaagaaaaatcgcgcaacgacctcgacacc
gcccgccgcgcggtggcgcaggccacgcggcaggtctacttcggcgtgcagtcgggccag
gcgcaggtgctggcgttcgaggcggccgaatcgtcatcgaagctcgcgctcgaagcgacc
cagaccggctaccgcgtcggcgtgcgtgtcaacctcgacgtgctcaatgcccagacccag
ctctactcgacccagcgcgacctcgccaaggcgcgctacgacgtgctggtcaacggcctg
cggctgcgccaggccgcgggcgtgctgtcggtcggtgacctcgacaccatcaacggcctg
ctcggccgctga
DBGET
integrated database retrieval system
