Latimeria chalumnae (coelacanth): 102360746
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Entry
102360746 CDS
T02913
Symbol
ADAR
Name
(RefSeq) adenosine deaminase, RNA specific
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04622
RIG-I-like receptor signaling pathway
lcm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102360746 (ADAR)
04623 Cytosolic DNA-sensing pathway
102360746 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102360746 (ADAR)
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
102360746 (ADAR)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102360746 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
TrmB
EAP30
HTH_5
HTH_24
WIYLD
MarR_2
Motif
Other DBs
NCBI-GeneID:
102360746
NCBI-ProteinID:
XP_014344140
Ensembl:
ENSLACG00000015329
UniProt:
M3XGS0
LinkDB
All DBs
Position
Un
AA seq
1150 aa
AA seq
DB search
MNRGDGQGRGSRRPSRDYRLPIPHQGLNGSQDFNQSNFRNQQIQFLRGHVAEAPLRPPRW
PKSPAERSQAEANVSQQRNYSRSVLYNQPTWGHFKSSSKVQELCTGFHRLTLGGGDNQED
ILNILKGLEQGRTLSAFQIAKQLGIKKKVVNHFLYKLLKQGQVCREGDRPPLWNIVVQLE
FDKLSPGRQLIRSSKEEDVIVEAEEGSLGTATSESEDESSVESSQEEDEAVNMADLKEQI
CEYLFGVKNSTALSIAKNVGLKRAKDVNNVLYALEKQGDISKENTFPPHWSLTEKKRERM
ENKKKASEVEVKKEPEEEAESEVAKMELPDNVAEAEAEATAAVSPPIAETNEKIENGKNV
VKVPKEENEMPLVETGAGGKSKGPSFGALPYDSIENGQWASDDIPFDLNVIEGGRDEQQS
IIETMEQSSHVSGPPGGGEKIGELEKLQACQLKNPVSGLMEYAQYNGLNCEFALLNQSGP
SHDPRFQIQAVIGGRRFPTAEASSKKTAKKEAAASALKTLLREAGGEQDAAEPQPSEPSD
LEMEAVLPQEPEPSQTLAQAALPVGKNPISMLMEYSQKSGNTCMFQMIGQEGPPHDPKFT
FRVKVGEQMFPVAVANSKKVAKQIAAENAVRVLMGESPDNLLSAKMVSDTPKDVPFDLAA
ARAAGMGDLINYLNKNAISGLLEYARSKGFAADLKLIDESGPPHDPKFTYQAKVGGRWFP
AVSANNKKQAKQEAADAALRVLIGEAEKAVRTGEVISELPVTGSTLHDRIAMLSHQRFNN
LTARIQHSLQGRKILAAIIMRKGEDDIGTVVSIGTGNRCVKGEELSLKGETVNDCHAEII
SRRGFIRFLYSELMKFDPASAEQSFLEVVSDGRMKIKTGVTFHLYISTAPCGDGALFDKS
CSEPPAVEGDNEHHPLFENVKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMS
CSDKILRWNVLGLQGALLSHFLHPVYLSSVTLGYLYSQGHLARAICCRMSRDGNAFQEGL
PSPFVLNHPQVGRVSVYDSTRQTGKTKESSVNWCLADENVEVLDGTKGKVDGPRLEISRV
SKINMYQLFQQICTKTDRKDLLSHGSYQEAKEAATDFQKAKVHFVQALEQMGYGNWIRKP
LEEKSFVCTE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaggtgacggccagggcagaggctcgcgtcgaccgtccagagattacagactc
cctatccctcaccagggtttgaacggctcccaagattttaaccagagcaacttcaggaac
cagcagatccagtttctcaggggacacgtagcagaagccccgcttcggccacctcggtgg
cccaaatcaccagccgagagatcccaggcagaagcgaatgtcagccagcagcgcaactac
agtcgaagcgtattgtataaccagccaacttggggtcactttaagtccagtagtaaagtc
caagaactgtgcactggttttcacaggctaacgcttggaggtggggacaaccaagaagat
attttgaacattttgaaagggcttgagcaaggaagaaccctctctgcattccagattgcc
aagcagcttggcataaagaaaaaagttgtaaatcatttcttgtacaagcttctaaagcaa
ggccaggtgtgcagggaaggggacagaccccctctttggaacatagtggtacagttagaa
tttgacaagttgagccctggcaggcagctaattcgttcttcgaaggaggaagacgtaata
gttgaggctgaagagggttcgttggggacagccacatcagaatcagaggacgagagttca
gtagaaagttcgcaagaggaagacgaagcagtcaacatggcggatcttaaagagcagatc
tgtgaatatttgtttggggtcaaaaactccactgcactttccattgctaagaacgtgggt
ctgaagagggccaaggatgtcaacaacgtcttgtatgcgctagaaaaacaaggggacatc
agcaaagagaacaccttcccccctcattggtccctcactgaaaagaagcgggagaggatg
gagaacaagaagaaagccagtgaagtcgaggtgaagaaagaaccagaagaggaagcggag
agtgaggttgccaagatggagttgccagacaatgttgctgaagctgaagccgaagccaca
gcagcagtcagtcctccaattgcagagacaaatgaaaagattgaaaacgggaagaatgtg
gtcaaggtgccaaaggaggaaaatgagatgcccttagttgagactggtgcaggggggaaa
tccaaaggcccatctttcggcgcgttgccctatgacagcattgaaaatgggcagtgggct
tctgatgacattccctttgacttgaacgtgattgagggggggagggatgagcagcaaagc
atcatagaaaccatggagcagtcatcccatgttagtggccctcccgggggtggagagaag
atcggggagctagagaagctgcaagcctgccagctgaagaacccagtgagtgggctgatg
gaatacgctcagtacaatggcctaaattgtgagtttgctctgttgaaccagagtgggcca
tctcatgacccaagatttcagatccaagctgtgattggtggaaggcgatttccgacggct
gaggcctccagtaagaagacagcgaagaaggaggcagctgccagcgctttgaaaactctg
ctgagggaggccgggggtgagcaggatgcagccgaaccgcagccttccgaaccgtccgac
ctggagatggaagcggttttgccacaagaaccggaaccatcccaaaccctagcccaggca
gctcttcctgttgggaagaacccaatcagcatgctgatggaatacagccagaaatcgggc
aacacgtgtatgtttcagatgatcgggcaggagggacccccccacgaccccaagttcaca
tttcgtgtgaaggttggggagcagatgttccctgttgctgttgccaacagtaagaaagta
gctaaacagatcgccgctgagaatgcagtgagagtactgatgggagagagtcccgacaat
ctgctgtctgcaaagatggtttctgacactccaaaggatgttccttttgacctagcggct
gcacgggcagccgggatgggagacctgataaattacctgaataagaatgccattagtggc
ctgctggagtacgcccgttccaaggggtttgcagcggatctgaagctgatagatgagtct
ggtcccccacatgatccaaagttcacttaccaggcgaaagtgggaggacgctggtttcct
gcagtgtcggctaataacaagaagcaagcgaaacaagaggcggctgatgctgctctgcgt
gttctgattggagaggctgagaaggctgtacgcacaggggaggtcatttcggagttacca
gtgaccggtagcactctgcacgacaggattgctatgctgagtcaccaacgtttcaacaac
ttgactgcccgcatccagcacagcctgcaaggccgcaagatcctggccgccattataatg
aggaagggcgaagatgacattggaactgtggtcagcatcgggactgggaacaggtgtgtc
aagggggaggagctgagtctgaagggggaaacagttaatgactgccatgcagagatcatc
tcccgcagggggttcatcagatttctttatagtgagctgatgaaatttgacccagcatca
gctgagcaaagcttcttggaagtggtgagcgatggcagaatgaaaataaaaacaggagtt
actttccatctctacatcagcactgctccctgtggagacggcgccctcttcgataagtcc
tgtagtgaaccacctgccgtggagggagacaacgagcatcatccgctctttgagaacgtg
aaacagggcaagctgcgcaccaaggttgagaatggggaaggcaccattcctgttgagtcg
agtgacattgttccgacctgggacggcatccagcatggggaaagactgcgcaccatgtcc
tgcagtgacaaaatcctgcgctggaacgtgctgggcctgcagggggcgctactttctcac
ttcttgcacccagtttatctcagctctgttacgctaggttatttgtacagccagggtcac
ctggcacgagccatctgctgccgcatgtcacgggatggaaatgctttccaggagggtttg
ccctcccccttcgtcctcaaccacccacaggttggaagagtcagtgtttacgactccacg
cgacagactgggaaaaccaaggagtccagtgtgaactggtgcctggctgacgagaatgtg
gaagtcctggatggtaccaagggcaaggtggatgggccaaggttagaaatctcccgggtc
tccaagatcaacatgtaccagttgttccagcagatatgcaccaagactgaccgcaaggac
ctgctgtcccatggcagctaccaggaggccaaggaggccgccactgacttccagaaggca
aaggtccattttgtgcaggcgctggagcagatgggctacggcaactggatccgcaagccg
ctggaagagaagagctttgtgtgcaccgagtaa
DBGET
integrated database retrieval system
