Larimichthys crocea (large yellow croaker): 104932556
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Entry
104932556 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: complement C1r-B subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104932556
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104932556
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104932556
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
104932556
Peptidases and inhibitors [BR:
lco01002
]
Serine peptidases
Family S1: chymotrypsin family
104932556
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Opsonins
104932556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
FXa_inhibition
EGF_CA
cEGF
Sushi
Plasmod_Pvs28
HRM
EGF
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
104932556
NCBI-ProteinID:
XP_019116795
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Position
XVI:4671346..4675485
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AA seq
625 aa
AA seq
DB search
MGWTYCVIWFLCLSVSECWQLPYTEPEIRGEVQSPQYPQPYLPNLLKQWHLWVPKGYKIR
LSLTHLDIKASAGCYEDSLMVLEDQKILGKFCGQENSTDHPGKELILSQSNRLTLIFQTN
DSTAEPQQHTGFFATYKAIDIDECLKVDSADGSGPLCSQICVNSPGSYHCSCHNGYKIHL
DQRTCLFSCSGHIFTKHEGHLSSPKYPGPSPPFLSCKYIISVEPRFTVTLNFTDKFHIMS
VDTEQGPRCLHHWLQVTIPDREPMKLCGGKGPGLIATNASTVRLDYHTDDEGLSHGWGLE
YYTTKVIDCGEPEPLLNGGMTFQNQYHSVVQYHCNEPFYTFPGGANVTFTCESDGKWRSK
HSDVTLTCIPVCGKPTKQIFTYQRIIGGSKAPDGTIPWQVLLNINGIRAGGMVIADNWIM
TAAHDLTHTGKPVSNKTVRVGGLVPTIASMXFDLTFISSYAVYLQAXSKXFIALIKVNES
ITFNSSIMPICLPPEAATYVTGMMGIVSGFGIMNIYPPRMTKKLMYADLPVVEQETCLNS
VNKVKMTRDNVPDLTNNMLCAGVPEGGKDSCLGDHGGPFALKHAGQFWAAGIVSWGVDCG
QQRMYGVYTRVSNYVDWIKKTMREN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggatggacctattgtgttatatggtttttgtgtttgtcagtgagtgagtgctggcag
ctgccttacactgagcctgaaatacgtggggaggtccagtcccctcagtatccccagcct
tatcttccaaacctgctgaagcaatggcacctctgggttcctaagggatacaagatccgg
ctgtctctaacacatctggatattaaagcttctgcaggctgctatgaagactctctgatg
gttcttgaagatcaaaagatcttgggaaagttttgtggccaggaaaattcaactgatcac
ccaggcaaagagctgatcctttctcaaagcaacaggctaactctcattttccaaacaaat
gactccactgcagaaccccaacagcacactggcttctttgctacctacaaggcaatagac
atagatgagtgtttgaaggtggactctgcagatggctcaggtccactctgctcgcagatc
tgcgtcaacagccctggttcttaccactgctcctgccacaatggatacaaaattcattta
gaccagcgcacatgtctgttctcctgtagtggacatatatttaccaagcatgagggacac
ctgtctagtccaaagtaccctggcccctcacctccttttctctcctgcaagtacatcatc
tctgtggagcccagattcactgtcactctcaacttcactgacaagttccacataatgagt
gtggacactgagcaaggacccaggtgtttacatcactggctgcaggtgaccatcccagac
agagagccaatgaagttgtgtggtgggaagggtccaggtctgatagctacaaatgccagt
actgtcagactggactaccacactgatgacgaaggcctgagtcatggctggggcctggag
tactacaccacaaaggtaattgattgtggagaacctgaacctttgctaaatggagggatg
acctttcagaatcagtatcattctgttgttcagtatcactgtaatgaaccattttacact
ttcccagggggtgcaaatgttactttcacctgtgaatcagacggaaagtggagatccaaa
cacagcgatgtcactctaacgtgtatacctgtctgtggcaagcccacaaaacaaatcttt
acctatcaaaggatcattggaggcagcaaagctccagatggtactatcccctggcaagtt
ttattgaatataaatggaataagggcaggagggatggtgattgcagacaactggattatg
actgcagctcatgacctaacacacactggaaaaccagtatcgaacaagactgtacgggtg
ggtggtcttgtgcctactatagcctccatgntttttgacttgacatttatttcctcctat
gctgtttatttgcaggcttaatcaaagtgatttattgccttaatcaaagtgaatgaatca
atcacgttcaactcatcaattatgccgatatgtttgccaccagaggctgccacctacgtc
actggcatgatgggaatagtgtcaggctttggtattatgaacatttaccccccacggatg
acaaagaagctgatgtatgcagacctccctgtggtggagcaggagacatgtcttaattca
gtcaataaggtgaagatgacaagagacaatgtaccagatctgacaaacaatatgctttgt
gctggagtccctgaaggtgggaaggattcatgcctaggtgatcatggaggccccttcgct
cttaaacatgctggacagttctgggctgctgggattgtcagctggggggtcgactgcgga
cagcagcgaatgtatggagtctataccagagtcagcaactatgtggactggatcaaaaag
actatgcgagagaactga
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