Larimichthys crocea (large yellow croaker): 104936945
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Entry
104936945 CDS
T04659
Symbol
caspase-3
Name
(RefSeq) caspase-3-like
KO
K02187
caspase 3 [EC:
3.4.22.56
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04115
p53 signaling pathway
lco04148
Efferocytosis
lco04210
Apoptosis
lco04623
Cytosolic DNA-sensing pathway
lco05132
Salmonella infection
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104936945 (caspase-3)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104936945 (caspase-3)
09143 Cell growth and death
04210 Apoptosis
104936945 (caspase-3)
04115 p53 signaling pathway
104936945 (caspase-3)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104936945 (caspase-3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104936945 (caspase-3)
09171 Infectious disease: bacterial
05132 Salmonella infection
104936945 (caspase-3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104936945 (caspase-3)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.56 caspase-3
104936945 (caspase-3)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C14: caspase family
104936945 (caspase-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
Tachystatin_B
CNOT1_TTP_bind
Motif
Other DBs
NCBI-GeneID:
104936945
NCBI-ProteinID:
NP_001290322
UniProt:
C6ZH48
LinkDB
All DBs
Position
X:27317013..27322707
Genome browser
AA seq
285 aa
AA seq
DB search
MSANGPGPGEDCADARRGDGQESEPSSSSAASSYMDVDARPGSHSFRYSLNYPCIGQCII
INNKNFDRSTGMNQRNGTDVDAANVMKVFAKLGYRAKVYNDQTVDQMRQVLTSVAKEDHS
CYASFVCVLLSHGDEGVFFGTDGSIELKYLTSLFRGDRCKSLVGKPKLFFIQACRGTDLD
AGIETDSADDGTTKIPVEADFLYAYSTAPGYYSWRNTMTGSWFMQSLCDMISKYGKEVEL
QHIMTRVNHKVAVEFESISHSPGFHAKKQIPCIVSMLTKEMYFSP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctaacggacccggacctggagaagactgcgcagacgcgaggagaggcgatgga
caagagtcggagccgtcttcctcctctgctgcctcctcctacatggacgtggatgccagg
ccgggctcccacagcttcagatacagcctgaactatccctgcatcggccagtgcatcatc
atcaacaacaagaactttgacaggagtacaggcatgaatcaacgaaatggtacggatgta
gatgcagccaacgtgatgaaagtgtttgcaaagttgggttatagagcaaaggtttacaat
gaccagacagtggaccagatgagacaggttttaacttctgttgcaaaggaagatcacagc
tgctacgcctcgttcgtctgtgttctgttgagtcatggagatgagggagtgttctttggt
acggatggctctatagagctgaagtacctaacatcactgtttcgaggcgatcgctgcaaa
tcactggtgggaaagcccaaacttttcttcatccaggcttgtcgaggcactgatctggat
gcaggcattgaaaccgacagcgctgatgatggcactacaaagatccctgtggaagctgac
ttcctctatgcatattccacagctccaggttactactcatggaggaatactatgaccgga
tcctggttcatgcagtcactgtgtgatatgatcagcaagtatggaaaagaagtggagctc
cagcacatcatgacacgagtgaaccacaaggtggcagtagagtttgagtctatctcccac
tcaccaggctttcatgcgaagaaacaaatcccatgcattgtgtcaatgctgaccaaagag
atgtatttttctccttga
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