Lysobacter capsici: LC55x_1968
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Entry
LC55x_1968 CDS
T04162
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lcp
Lysobacter capsici
Pathway
lcp01501
beta-Lactam resistance
lcp02024
Quorum sensing
Module
lcp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_1968
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_1968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_1968
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_1968
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_1968
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LC55x_1968
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LC55x_1968
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LC55x_1968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
XRCC4_C
Motif
Other DBs
NCBI-ProteinID:
ALN85246
LinkDB
All DBs
Position
complement(2168324..2169796)
Genome browser
AA seq
490 aa
AA seq
DB search
MLTPLAAALILAGCASTRGLEPSGHALDADGLQATRSLAQVSAAEFPKRDWWTSLGDAQL
NALIDEALTGTPSLDAADARVRQAVAQAGLADAARKPTVGAAAQYSGVELPETLAPDPIG
GKYLGAHVLMLEFKYSPDLWGGKRARWQAALGQTRAAEVEAQAARLTLSSNIARAYVSLA
QSFEALDVATSEKQRSDRLLGLGQQRVKAGLDNQLQIRNAQSASASADQQIQAAQQQIDA
TRNALAALLGKGPDRGLEIARPTLLAAKNPAVPSVLPSELLGHRPDVVAARWRVEASSHG
IKAAKAEFYPTVNLSAIVGLATGHLSDLFTSEAKLLQGGPAFSMPIFDGGRLRNNLAETD
AEYDLAVANYNQSLIGALREVADAVQSSRSLDGQIASAQQARDAAQQAWQIASSRYRAGL
GTQLDVLSAQRPLLQLDQQLAGLRAQRYAAQIDLDRALGGGLELSSPDPVASTVPNESSN
TQVIAKAPTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgctcacgccgctggccgccgcgctgatcctcgccggctgcgccagcacccgcggcctg
gagccgtccggccacgcgctcgacgccgacggcctgcaggccacccgcagcctcgcccag
gtctcggcggccgaatttcccaagcgcgattggtggacctcgctcggcgacgcccagctc
aatgcgctgatcgacgaagccctgaccggcacgcccagcctcgacgccgccgacgcgcgc
gtgcgccaggcggtcgcccaggccggattggccgatgccgcgcgcaagccgaccgtcggc
gccgccgcccagtactccggggtggaactgcccgagaccctcgcccccgatccgatcggc
ggcaagtacctcggcgcgcacgtgctgatgctcgaattcaagtacagcccggacctgtgg
ggcggcaagcgcgcgcgttggcaggccgcgctcggccagacccgcgcggccgaagtcgaa
gcgcaggccgcgcgcctgaccttgtcgtcgaacatcgcccgcgcctatgtgtcgctggcg
cagtcgttcgaagcgctggacgtggcgacttcggaaaagcagcgctccgatcgcctgctc
ggcctgggccagcagcgggtcaaggccggcctggacaaccaactgcagatccgcaacgcg
cagagcgccagcgccagcgccgatcagcagatccaggccgcgcagcagcagatcgacgcc
actcgcaacgcgctcgccgcgctgctgggcaagggccccgatcgcggtctcgagatcgca
cgcccgaccctgctcgcggcgaagaacccggcggtgccgtcggtgttgccgagcgaattg
ctgggccatcgccccgacgtggttgccgcgcgctggcgggtcgaagccagttcgcacgga
atcaaggcggccaaggccgagttctatccgaccgtgaacctcagcgcgatcgtcggcctg
gccaccggccacctgtcggacctgttcaccagcgaagccaaactgctgcaaggcggcccg
gccttcagcatgccgatcttcgacggcggccgcctgcgcaacaacctggccgagaccgac
gccgagtacgacctcgcggtcgcgaactacaaccagagcctgatcggcgcgttgcgcgaa
gtcgccgacgcggtgcagagctcgcgttcgctcgacggccagatcgcctcggcgcagcag
gcgcgcgacgccgcgcagcaggcctggcagatcgccagcagccgctaccgcgccggcctg
ggcacccagctcgacgtgctctccgcgcagcgtccgctgctgcaactcgatcaacaactc
gccggcctgcgcgcgcagcgctacgccgcgcagatcgacctggaccgcgcgctcggcggc
ggactcgaactcagttcgcccgacccggtcgcgtccaccgttcccaacgaatcctccaat
acccaagttatcgcgaaggccccgacgccatga
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