Lysobacter capsici: LC55x_2640
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Entry
LC55x_2640 CDS
T04162
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lcp
Lysobacter capsici
Pathway
lcp01501
beta-Lactam resistance
lcp02024
Quorum sensing
Module
lcp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_2640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_2640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_2640
01504 Antimicrobial resistance genes [BR:
lcp01504
]
LC55x_2640
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_2640
Antimicrobial resistance genes [BR:
lcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LC55x_2640
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LC55x_2640
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LC55x_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
ALN85905
LinkDB
All DBs
Position
2909017..2910441
Genome browser
AA seq
474 aa
AA seq
DB search
MRAHGVLIALVVTVVSGCAAGPDYVRPSLAVPAEYKEARGEPAKDWNPAAPADASDRGAW
WSVFHDPALDGLMAQVEVSNQNLAAAEAGYRQARALVREQRAALFPSVSLDGSGTRARSA
GSSGSSVGQTYRYDIGASWEPDVWGRIRRGVEGARAQADASAADLASARLAAQGELAANY
FQLRETDIETGLLQSTVAAYQRALTITGNRYAAAIAAKSDVLQAQTQLANAQASLANLTQ
QRAQLEHAIAVLVGKTPADFALVPDPSWRAQVPEVPAGVASELLQRRPDIAAAERRVAAA
NAEVGAAQAAFFPSFTLSASRGGGASQLGRLFDAPSSLWSLGVALAQTLFDAGARRATRD
AARAGYDQTVAQYRQTALTAFQDVEDQLVATRVLVERTAFYAQASQSADEAERIALNRYK
SGLVAYTDVVVAQAAALSARQSLAQTTRDRQTTAVALIQALGGGWHAGQGEANP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctcatggtgtgcttatcgcgttggtggtcacggtggtgagcggttgcgccgcc
ggaccggactatgtgcggccgagtctggccgtgccggccgagtacaaggaagcgcgaggc
gaaccggccaaggactggaaccccgcggcgccggccgacgcgagcgatcgcggcgcgtgg
tggtcggtgttccacgatccggcgctggatggattgatggcgcaggtcgaggtgtcgaac
cagaatctcgccgcggccgaagccgggtatcggcaggcgagggccttggtgcgcgaacag
cgcgcggctctgtttccgagcgtgagcctggacggttcggggactcgcgcgcgcagcgcc
ggcagcagcggttccagcgtcggccagacctatcgctacgacatcggcgcgagttgggag
cccgatgtatggggccgcatccgacgcggtgtcgaaggtgcgcgcgcgcaggccgatgcc
agcgcggcggatctggcctcggcgcgattggccgcgcaaggcgaactggcggcgaactat
ttccagttgcgcgaaaccgatatcgaaaccgggctgttgcagtcgacggtcgcggcgtac
caacgcgccttgaccatcaccggcaatcgctacgccgccgcgatcgcggccaagagcgac
gtgctgcaggcgcagacccagttggccaatgcccaggccagcctggcgaacctgacccag
caacgcgcacagctcgaacacgcgatcgcggtactggtcggaaaaacgccggccgatttc
gcgctcgtgcccgatccgtcctggcgcgcgcaggtgcccgaggtgccggcgggcgtggcg
tccgaattgctgcagcgtcgtcccgacatcgccgcggccgagcgccgggtggccgcggcc
aatgccgaagtcggcgccgcccaggccgcgttcttcccgagtttcaccctgagcgcttcg
cgcggcggcggcgcctcgcagctcggacgtttgttcgatgcgccgtcgagcctgtggtcg
ctcggcgtggccttggcccagaccttgttcgacgcgggcgcgcgccgcgccacccgcgac
gcggcgcgcgccggctacgaccagaccgtggcccagtaccggcagaccgcattgaccgcg
ttccaggacgtcgaggaccaactggtcgccacccgcgtgctggtcgaacgcaccgccttc
tacgcccaggcctcgcaatcggccgacgaagccgagcgcatcgccttgaaccgctacaag
agcggcctggtcgcctacaccgacgtggtggtcgcgcaggccgccgcgctgtcggcgcgg
cagtcgctggcccagacgacccgcgatcgccagaccaccgcggtcgcgttgattcaggcg
ctgggtggcggttggcatgcggggcagggcgaagccaatccctga
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