Limnospira fusiformis: HFV01_16480
Help
Entry
HFV01_16480 CDS
T06534
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
lfs
Limnospira fusiformis
Pathway
lfs01501
beta-Lactam resistance
lfs01503
Cationic antimicrobial peptide (CAMP) resistance
lfs02020
Two-component system
lfs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HFV01_16480
09132 Signal transduction
02020 Two-component system
HFV01_16480
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HFV01_16480
01503 Cationic antimicrobial peptide (CAMP) resistance
HFV01_16480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfs02000
]
HFV01_16480
02044 Secretion system [BR:
lfs02044
]
HFV01_16480
01504 Antimicrobial resistance genes [BR:
lfs01504
]
HFV01_16480
Transporters [BR:
lfs02000
]
Other transporters
Pores ion channels [TC:
1
]
HFV01_16480
Secretion system [BR:
lfs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HFV01_16480
RTX toxin transporter
HFV01_16480
Multiple protein transporter
HFV01_16480
RaxAB-RaxC type I secretion system protein
HFV01_16480
Antimicrobial resistance genes [BR:
lfs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HFV01_16480
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HFV01_16480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJB27095
LinkDB
All DBs
Position
3403932..3405884
Genome browser
AA seq
650 aa
AA seq
DB search
MDKNPEPSTMSDRFWWLRFLLIAIATSGLCITLAVSLETPPVTQANASRNTPLLNPPDLP
QTSPNPSINLDNHRTEKTRVKLPQIMGNIARFSPFKLENEPSPTEPNLQIISPESSLERD
SNQKAIANPQPRPTIAATLPKSAEYRVNNSLYNWLDGIEIPPQFSQSQPLINSPTNEGTP
SPEIPQFIPENQDNAVKLTLPDVVFLTLSNNRNIKNQYLERIIQRRDLQVAEDKFAPEFT
PNLSIEWQDIRQGGQSLSMTSGLVLGAQMVIKIPTGGELNMGWTGRGERQGSSFNAENRL
RQNLELSFRQPLLRDSGIAVNQASIKIARLDEAINILNLKNTLIDQITQVILAYRNLIQA
QERVKIQVQSLASSQQQVENTQFLIDVGRLPAIELIPAQRGVKNNEISLLDVKNNLKRQQ
LALLNILDLEQDIVPVAVQIDLDELEMPELQEIREIALVNRPDYLQAKLEIEKAETALII
AENNRRWQIDLDTGIRHNPSPNIVEDRTELRAGIVFSKELGDRTIEQEFERRRISLIQAQ
NDLVEERQQIDINVANAVRDVRDNYQKLELAQELTEFRRQELNNEEEKIRLGVGNTSVVD
LVRFQDDLVNAQNAELNAKIDYLNSLTELDRILGTTLERWDIIVETETPL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaatcccgaaccatctacaatgagcgatcgcttttggtggctgagattttta
ctaattgcgatcgccacatcaggtttatgtattaccctggctgttagcttagaaactcct
ccagttacccaagctaacgcctcccgtaacacgccattactaaaccctcccgaccttccc
caaacgtcacccaatcccagcattaatttagataatcataggacagaaaaaactcgggtt
aaactcccccaaattatggggaatatagccaggttctctcccttcaaactagaaaatgaa
ccctcgccaactgaacccaatttacagattatctcgccagaatcttcgttagaaagagat
agcaatcaaaaggcgatcgctaacccccaaccccgaccaaccattgccgccaccctcccc
aaatcagcagaataccgcgtcaataatagcttatataattggttagatggcatagaaatt
cccccccaatttagccaatctcaacccctgattaactcccccacaaatgaaggtacaccc
tccccagaaattccccagtttatcccagaaaatcaagataatgctgtgaaattaacccta
ccagatgtggtttttctcactctttccaataatagaaacattaaaaaccagtacctagaa
agaattatacagcgtcgagatttacaagtagcggaggacaaatttgctccagagtttacc
cccaatttatcaattgaatggcaagatattcgacaggggggacaaagtctttctatgaca
tcagggttagttttaggggctcaaatggtgataaaaattcccacagggggagagttaaat
atgggctggacaggtcgcggcgagagacaaggaagcagctttaatgcggaaaatagatta
agacagaatttagaattatccttccgacaaccccttttaagagatagtggaatcgccgta
aatcaagcgtcgataaaaattgctcgccttgatgaagctattaatattttaaacctcaag
aatactttgattgaccaaatcacccaagttattttagcttatcgaaatttaatccaagcc
caggaaagggtcaaaattcaagtgcagtctttggcttcctctcaacaacaagtagaaaat
actcaatttttaattgatgtaggtcgtcttccggctattgagttaattcccgcccaacgc
ggagttaaaaataatgaaattagccttttagatgttaaaaataaccttaaaaggcaacaa
ttagcattattgaatattctggatttagagcaagatattgttccggtggctgtccaaata
gatttggatgaactagaaatgccagaattgcaggaaattcgagaaatcgccttagtcaat
agaccagattatttacaggctaaactagaaatagaaaaggcagaaactgctttaattata
gcggaaaataatcgacgatggcagattgacttggatacaggaattcgccataatccctca
ccgaatattgtagaagatagaacggaattaagggcgggaattgtgtttagcaaagaattg
ggcgatcgcactatagaacaagagtttgagcgccgtcgtattagtctaatacaagcccaa
aatgatttggtagaagaaagacaacaaattgatattaatgtagccaatgctgtgcgggat
gttcgggataattatcaaaaattagagttggctcaagagttgacagaatttaggagacag
gaactaaataatgaggaagaaaagattaggctaggtgtgggtaatacttctgtagtcgat
ttagtccggtttcaagatgatttagtcaacgctcaaaatgcggaattaaatgccaaaatt
gactacctcaactcgttaactgaattagaccgaattttaggcacaacattagaaagatgg
gatattattgtggaaacagaaactcccttgtaa
DBGET
integrated database retrieval system
