KEGG   Companilactobacillus futsaii: FG051_07435
Entry
FG051_07435       CDS       T06830                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lft  Companilactobacillus futsaii
Pathway
lft03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lft00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FG051_07435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lft03019]
    FG051_07435
Messenger RNA biogenesis [BR:lft03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FG051_07435
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453 SIS_2
Other DBs
NCBI-ProteinID: QCX24953
UniProt: A0A5B7SZU9
LinkDB
Position
1512253..1513944
AA seq 563 aa
MSFKVKNNEVAVFAIGGLGEIGKNMYGVQYQDELIVIDAGIKFPEDELLGIDYVISDYSY
LVENKDKIKGLFITHGHEDHIGGIPYLLQQLPNIPIYAGPLACALIKGKLEEHGLLRTTE
MHVLHEDDVIKFPKTSVSFFRTTHSIPDTLGIAVHTPQGIIVETGDYKFDLTPVAGLPSP
NLQKMAALGAKGVLCLLSDSTNAEIPTFSKSERSVGLTIHQIFETIQGRIIFATFASNIY
RISQAVDAAMQQNRKIAVFGRSMEQAIENGRELGYLNIPDSMLIDPHALNQTPASETLIL
CTGSQGEPLAALSRIANGTHRQITIQPGDTVIFSSNPIPGNTISVNHLINQLSEAGAEVI
HGKVNNIHASGHGGQEEQELMLRLMKPKFFMPIHGEYRMLKIHTELAELCDVPQDHSFLL
ENGDVLALTKDTARVAGHFPAGDVYVDGKGVGDIGNVVIHDRQVLSEEGMVVVVATIDYQ
KHIVLAGPDILSRGFVYMRESGELINQAQKRVFHLIKNAFDDENEKVTEATLKRIIIEGL
QEFLYKRTARNPVILPMLIGTSI
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgtcctttaaagttaaaaataatgaagttgccgtctttgccatcgggggccttggcgag
atcggtaaaaatatgtatggagttcaatatcaagacgaattgatcgttattgatgccgga
atcaagtttccagaagatgaacttctcggaattgactatgtcatttctgattacagctac
ttagtagaaaataaggataagatcaagggtttatttatcactcacggtcacgaagaccat
attggtggtatcccttatctccttcaacagcttcctaacatcccaatttatgccggtcca
ttagcttgtgcattaattaaaggtaaattggaagaacatggtctattaagaacaaccgaa
atgcacgtcttacatgaagatgacgtcatcaaattcccaaagactagtgtttcattcttt
agaacgactcactcaattcctgataccttaggtatcgctgttcatacccctcagggaatt
attgttgaaactggtgattacaagtttgacttgacaccagttgctggattgccatcacct
aatttacaaaaaatggctgcacttggagctaaaggtgttttatgtttactatctgatagt
actaatgcagaaatacctactttttctaaatcggaacggtctgttggattaacaatccat
caaatctttgaaacaattcaaggacggatcatctttgctacttttgcttctaacatttat
cgtatttctcaagcggtcgatgcagcgatgcaacagaaccgaaaaattgccgtcttcggt
cgaagtatggagcaagccattgaaaatggtcgtgaactaggatatttgaatattcctgat
agtatgttaatcgatcctcatgctttgaaccaaactccagcatctgaaactttgatccta
tgtactggatcacaaggtgaaccattagctgctttgagtagaattgccaatggtactcac
cgacaaattactattcaaccaggtgacacggttattttctcaagtaatcctatccctggt
aatacgatcagtgttaaccatttaatcaatcaactttcagaagctggtgctgaggttatt
catggtaaagtcaacaatatccatgcttctggtcacggtggccaagaagaacaggaattg
atgcttcgtctaatgaagcctaagttctttatgccaattcacggtgagtacagaatgtta
aagattcacacagaattagctgaattgtgcgacgtaccacaagatcactccttccttttg
gaaaacggtgatgttttagccttgaccaaagacacagcacgtgtagctggacacttccct
gctggagatgtctacgtcgatggtaaaggcgttggcgatatcggaaatgttgttatccac
gatcgtcaagttctttcagaagaaggaatggtcgttgtcgttgctacgatcgattatcaa
aaacacattgtcttagctggtcctgacattctttcacgtggttttgtttatatgcgtgag
tcaggtgaattgatcaatcaagcacaaaagcgtgttttccatttgattaaaaatgctttt
gacgatgaaaatgaaaaagttactgaagcaacattaaaacgcatcatcattgaaggatta
caagaattcttgtacaagcgtacagctagaaatcctgttatcttgccaatgttaattgga
acttcaatctaa

DBGET integrated database retrieval system