Companilactobacillus futsaii: FG051_07435
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Entry
FG051_07435 CDS
T06830
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lft
Companilactobacillus futsaii
Pathway
lft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FG051_07435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lft03019
]
FG051_07435
Messenger RNA biogenesis [BR:
lft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FG051_07435
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
SIS_2
Motif
Other DBs
NCBI-ProteinID:
QCX24953
UniProt:
A0A5B7SZU9
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Position
1512253..1513944
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AA seq
563 aa
AA seq
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MSFKVKNNEVAVFAIGGLGEIGKNMYGVQYQDELIVIDAGIKFPEDELLGIDYVISDYSY
LVENKDKIKGLFITHGHEDHIGGIPYLLQQLPNIPIYAGPLACALIKGKLEEHGLLRTTE
MHVLHEDDVIKFPKTSVSFFRTTHSIPDTLGIAVHTPQGIIVETGDYKFDLTPVAGLPSP
NLQKMAALGAKGVLCLLSDSTNAEIPTFSKSERSVGLTIHQIFETIQGRIIFATFASNIY
RISQAVDAAMQQNRKIAVFGRSMEQAIENGRELGYLNIPDSMLIDPHALNQTPASETLIL
CTGSQGEPLAALSRIANGTHRQITIQPGDTVIFSSNPIPGNTISVNHLINQLSEAGAEVI
HGKVNNIHASGHGGQEEQELMLRLMKPKFFMPIHGEYRMLKIHTELAELCDVPQDHSFLL
ENGDVLALTKDTARVAGHFPAGDVYVDGKGVGDIGNVVIHDRQVLSEEGMVVVVATIDYQ
KHIVLAGPDILSRGFVYMRESGELINQAQKRVFHLIKNAFDDENEKVTEATLKRIIIEGL
QEFLYKRTARNPVILPMLIGTSI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttaaagttaaaaataatgaagttgccgtctttgccatcgggggccttggcgag
atcggtaaaaatatgtatggagttcaatatcaagacgaattgatcgttattgatgccgga
atcaagtttccagaagatgaacttctcggaattgactatgtcatttctgattacagctac
ttagtagaaaataaggataagatcaagggtttatttatcactcacggtcacgaagaccat
attggtggtatcccttatctccttcaacagcttcctaacatcccaatttatgccggtcca
ttagcttgtgcattaattaaaggtaaattggaagaacatggtctattaagaacaaccgaa
atgcacgtcttacatgaagatgacgtcatcaaattcccaaagactagtgtttcattcttt
agaacgactcactcaattcctgataccttaggtatcgctgttcatacccctcagggaatt
attgttgaaactggtgattacaagtttgacttgacaccagttgctggattgccatcacct
aatttacaaaaaatggctgcacttggagctaaaggtgttttatgtttactatctgatagt
actaatgcagaaatacctactttttctaaatcggaacggtctgttggattaacaatccat
caaatctttgaaacaattcaaggacggatcatctttgctacttttgcttctaacatttat
cgtatttctcaagcggtcgatgcagcgatgcaacagaaccgaaaaattgccgtcttcggt
cgaagtatggagcaagccattgaaaatggtcgtgaactaggatatttgaatattcctgat
agtatgttaatcgatcctcatgctttgaaccaaactccagcatctgaaactttgatccta
tgtactggatcacaaggtgaaccattagctgctttgagtagaattgccaatggtactcac
cgacaaattactattcaaccaggtgacacggttattttctcaagtaatcctatccctggt
aatacgatcagtgttaaccatttaatcaatcaactttcagaagctggtgctgaggttatt
catggtaaagtcaacaatatccatgcttctggtcacggtggccaagaagaacaggaattg
atgcttcgtctaatgaagcctaagttctttatgccaattcacggtgagtacagaatgtta
aagattcacacagaattagctgaattgtgcgacgtaccacaagatcactccttccttttg
gaaaacggtgatgttttagccttgaccaaagacacagcacgtgtagctggacacttccct
gctggagatgtctacgtcgatggtaaaggcgttggcgatatcggaaatgttgttatccac
gatcgtcaagttctttcagaagaaggaatggtcgttgtcgttgctacgatcgattatcaa
aaacacattgtcttagctggtcctgacattctttcacgtggttttgtttatatgcgtgag
tcaggtgaattgatcaatcaagcacaaaagcgtgttttccatttgattaaaaatgctttt
gacgatgaaaatgaaaaagttactgaagcaacattaaaacgcatcatcattgaaggatta
caagaattcttgtacaagcgtacagctagaaatcctgttatcttgccaatgttaattgga
acttcaatctaa
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