Companilactobacillus futsaii: FG051_10330
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Entry
FG051_10330 CDS
T06830
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lft
Companilactobacillus futsaii
Pathway
lft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FG051_10330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lft03019
]
FG051_10330
03009 Ribosome biogenesis [BR:
lft03009
]
FG051_10330
Enzymes [BR:
lft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FG051_10330
Messenger RNA biogenesis [BR:
lft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FG051_10330
Ribosome biogenesis [BR:
lft03009
]
Prokaryotic type
rRNA helicases
FG051_10330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
CMS1
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
QCX25456
UniProt:
A0A5B7T0C4
LinkDB
All DBs
Position
complement(2064886..2066409)
Genome browser
AA seq
507 aa
AA seq
DB search
MKFKELDLDPRLLSAVDEAGFEETTPIQAQTIPLVMTGADVIGQAQTGTGKTAAFGLPLL
NAVDTQSSDIQALIISPTRELAIQTQEELYRLGKEKKVKVQSVYGGSDIRRQIRSLKNHP
QIVVGTPGRMLDHINRHTLKLHNVKTVVLDEADEMLDMGFVEDIESILSNVPNKHQTLLF
SATMPKPIMKIADKFMNDPEVVKIKSKELTADKIEQYFVKAKDYEKFDLMTRLFDVQAPE
LALIFGRTKRRVDELTRGLQARGYNAEGIHGDLSQDKRTSVLRKFKAGKLDFLVATDVAA
RGLDISGVSHVYNYDIPQDPDSYVHRIGRTGRAGHSGVSVTFVTPNEMGYLRTIENLTKK
RMEPLAPPTDKEVLKGQLESVKQDIKDTLEHDKHLDRFDSAVQELLAEYSPEDIARIFLS
ESIKDAETVPVKIAPERPLPSRKVSHSRSGHGRRGRYNGHRGGNNNHHRRRNNDRRDDKK
GGKRRENDNKRHGRSKKSFKIRTNLEK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaaagaattagatttagatcccagattattgagtgccgtagacgaagccggt
tttgaagaaactacacctattcaagctcaaactattccactagttatgactggcgctgac
gttatcggacaagctcaaactggtacaggtaagacggcagcctttggcttaccattgcta
aatgccgttgatactcaatctagcgatattcaagcattgattatctcaccaactagagaa
ttagctatccaaacacaagaagaattgtatcgtttgggtaaggaaaagaaagttaaggtt
caaagtgtttacggtggttctgatattagacgccaaatccgttcactgaagaatcatcct
caaattgtcgttggtacaccgggtagaatgctcgatcatatcaaccgtcacactttgaag
ttgcacaacgttaaaacagttgtccttgatgaagctgatgaaatgctagatatgggattc
gttgaagatattgaaagtattctttctaacgttcctaacaagcaccaaacattgttgttc
tcagctacaatgccaaaacctatcatgaagattgctgataagtttatgaatgatccagaa
gtagttaagatcaaatcaaaagagttaactgctgataagatcgaacaatattttgttaaa
gctaaagattatgagaaatttgacttgatgactcgtttattcgatgttcaagcaccagaa
ctagcattgatctttggtcgtactaagagacgtgttgatgagttaactcgtggattacaa
gctcgtggttacaatgctgaaggtatccacggtgatttgtcacaagacaaacgtactagc
gtattgcgtaagttcaaggctggtaagttggacttcttagttgctactgatgtggctgct
agaggtttggatatttcaggtgtatcacacgtttacaactatgatattcctcaagatcct
gatagttacgttcaccgtattggtcgtacaggacgtgccggacattctggtgtgtcagta
acttttgttacacctaacgaaatgggttacttacgtacaattgaaaacttaactaagaaa
cgtatggaaccacttgctccacctactgataaagaagttcttaagggacaacttgaatca
gttaagcaagatatcaaggatactttggaacatgacaaacaccttgatcgtttcgattca
gccgttcaagaattacttgctgaatactcaccagaagacattgctcgtattttcttgagt
gaatcaattaaggatgccgagacagttcctgttaaaattgctcctgaaagaccacttcca
tcaagaaaggttagtcacagccgttctggtcatggccgtcgtggtagatataacggtcac
cgtggtggtaacaataatcaccatcgtcgtcgcaacaatgatcgtcgtgatgacaaaaaa
ggtggcaagcgtcgtgaaaatgataataaacgtcatggtcgcagcaagaagtcattcaag
atcagaactaatctagaaaaataa
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