Pseudoleptotrichia goodfellowii: JCM16774_0443
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Entry
JCM16774_0443 CDS
T06508
Name
(GenBank) putative D-tyrosyl-tRNA(Tyr) deacylase
KO
K12340
outer membrane protein
Organism
lgo
Pseudoleptotrichia goodfellowii
Pathway
lgo01501
beta-Lactam resistance
lgo01503
Cationic antimicrobial peptide (CAMP) resistance
lgo02020
Two-component system
lgo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lgo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JCM16774_0443
09132 Signal transduction
02020 Two-component system
JCM16774_0443
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JCM16774_0443
01503 Cationic antimicrobial peptide (CAMP) resistance
JCM16774_0443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgo02000
]
JCM16774_0443
02044 Secretion system [BR:
lgo02044
]
JCM16774_0443
01504 Antimicrobial resistance genes [BR:
lgo01504
]
JCM16774_0443
Transporters [BR:
lgo02000
]
Other transporters
Pores ion channels [TC:
1
]
JCM16774_0443
Secretion system [BR:
lgo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JCM16774_0443
RTX toxin transporter
JCM16774_0443
Multiple protein transporter
JCM16774_0443
RaxAB-RaxC type I secretion system protein
JCM16774_0443
Antimicrobial resistance genes [BR:
lgo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JCM16774_0443
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JCM16774_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FUR
TruB_N
Ycf54
Motif
Other DBs
NCBI-ProteinID:
BBM35518
UniProt:
A0A510J8D3
LinkDB
All DBs
Position
418405..419685
Genome browser
AA seq
426 aa
AA seq
DB search
MRIKQIGVAVTMMLFALPVFVFGQKITVQEAAEMAIKNNKDIKIGMLEVEKGKLDVNKAW
KSAYFKVTYNATANKYFKDVKSPFTGKYNQAYGQNVTLAQPIYTGGAIKSGIEIGKNYLS
LMELSLDKIRKDTMLSVIQAYIDVYEAENTLEVLKKSKEALSRNYEEQKEKYKLRLVTKP
EFIEAERSLKAIEADVIQQTSNIEIAKEALGNMIGVKDSEKIEIVPFTVEEKFSKAVNLK
DDLAKLTTRNTEYQMALKQKEISRKNIDLEKADLRPKVTGVVTYGTSDRTKFSEVSKTKN
YNGTIGLNLSWQIFDWGENKLDVEKAKRNHEIKEIEAEKALDDLKVGMKKVYYQLQALEK
SLEAKKIAVEKAEEVYELEQERYSYRLITMRDLLNAESNLRQSRTDYISSKLRYYYLVSR
YGAFLD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaaacaaatcggcgtagcagttacaatgatgttatttgcattgcctgttttc
gttttcggacaaaagataaccgtacaggaagcggcggaaatggcaataaaaaataacaaa
gatataaaaatcggaatgcttgaagtggaaaaaggtaaacttgatgtgaataaagcgtgg
aaaagtgcttatttcaaggtaacttataatgcaacggcaaataagtattttaaagatgtt
aaatcgccttttacaggtaaatacaatcaggcatacggacaaaatgttacattggctcag
cctatttatacagggggagctataaaatcggggatagaaataggaaaaaactatttgtcg
ttaatggaactgtctctggataaaataagaaaagatacgatgctgagtgttatacaggcg
tatatagatgtctatgaagctgaaaatacgcttgaagtgctgaaaaagtccaaagaggcg
ttatcgagaaattatgaggaacagaaagaaaaatataaattaagactggttacaaagcct
gaatttatagaagctgaaagaagtctgaaagcaatagaagccgatgtgatacagcaaact
tcaaatatagaaatagcaaaagaagcattggggaatatgatcggagtaaaagacagcgag
aaaatagaaatcgtcccttttactgtagaagaaaagttcagtaaagccgtaaatctgaaa
gatgatttggcaaaacttacaactagaaataccgaatatcaaatggctttaaaacagaag
gaaataagcagaaaaaacatagatcttgaaaaagccgatttgcgacctaaagtaacagga
gtagtaacttacggaacttctgacagaacaaaattttccgaagtttcaaaaacgaaaaac
tataacggtacaatagggttaaatttatcatggcagatattcgactggggagaaaataaa
ctggatgtggaaaaagccaaaagaaatcatgaaataaaagaaatagaagcggaaaaagct
cttgatgatttgaaagtgggaatgaaaaaagtctattatcagctgcaggcccttgagaaa
agccttgaagctaagaaaatagcagtcgaaaaagctgaagaagtgtatgaactcgaacag
gaaagatattcttacagactgataacaatgagagatctgcttaatgccgaatcaaactta
agacagagcagaacagactatataagttcaaaattgagatattattacttagtttcaaga
tacggagcatttttagactaa
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