Schleiferilactobacillus harbinensis: D1010_08940
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Entry
D1010_08940 CDS
T06855
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1010_08940 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_08940 (nth)
Enzymes [BR:
lhb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D1010_08940 (nth)
DNA repair and recombination proteins [BR:
lhb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1010_08940 (nth)
Prokaryotic type
D1010_08940 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QFR23519
UniProt:
A0A5P2TVC3
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All DBs
Position
complement(1731340..1731993)
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AA seq
217 aa
AA seq
DB search
MTELWSDDRLRWGMHELFKLIPNALGALHAESPYQLLIAVILSAQTTDAAVNKVTPALFA
AYPTPAALAAAKPADIEQFIHTIGLFHTKAKHIQETAQQLVTNFNSTVPHTHPELESLPG
VGRKTANVVLGDAFGVPSFAVDTHVTRISKRLPAVSDKASVRDIERRWTTALPETEWVQG
HHTLILFGRRYCMARNPRCAECPLAPYCATGKPRLSQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttatggtcagatgatcgtttgcgctggggcatgcacgaactattcaaactg
attcccaatgccctgggtgcgctgcacgctgaatcgccataccaattattgattgcggta
atcttgagtgcccaaaccactgacgcggcggtcaataaggtaacgccggcgttgttcgcg
gcctatccgacaccagccgccctggccgccgccaaacctgctgatattgagcagttcatt
catacgatcggcctgtttcacacgaaggctaaacatattcaggaaaccgctcagcagctg
gtgacaaacttcaacagtactgttccgcacacccatccagaattggaaagtttgcccggg
gtcgggcgcaagaccgccaacgtggtcttgggcgatgccttcggagtacccagctttgcc
gtagacacccacgttactcggatctccaagcggctgcctgcggtctcagataaggccagc
gtacgcgacatcgagcggcgctggacaacggccttgcctgaaacagagtgggtacaaggg
caccacacgctgattcttttcggccggcgatactgcatggcccggaacccgcggtgtgca
gagtgtccgttggcgccatattgtgccacagggaagccgcgactgagccaataa
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