Leptotrichia hofstadii: JCM16775_0216
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Entry
JCM16775_0216 CDS
T06149
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
lhf
Leptotrichia hofstadii
Pathway
lhf01501
beta-Lactam resistance
lhf01503
Cationic antimicrobial peptide (CAMP) resistance
lhf02020
Two-component system
lhf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JCM16775_0216
09132 Signal transduction
02020 Two-component system
JCM16775_0216
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JCM16775_0216
01503 Cationic antimicrobial peptide (CAMP) resistance
JCM16775_0216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhf02000
]
JCM16775_0216
02044 Secretion system [BR:
lhf02044
]
JCM16775_0216
01504 Antimicrobial resistance genes [BR:
lhf01504
]
JCM16775_0216
Transporters [BR:
lhf02000
]
Other transporters
Pores ion channels [TC:
1
]
JCM16775_0216
Secretion system [BR:
lhf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JCM16775_0216
RTX toxin transporter
JCM16775_0216
Multiple protein transporter
JCM16775_0216
RaxAB-RaxC type I secretion system protein
JCM16775_0216
Antimicrobial resistance genes [BR:
lhf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JCM16775_0216
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JCM16775_0216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF489
Motif
Other DBs
NCBI-ProteinID:
BBM37532
UniProt:
A0A510JDZ0
LinkDB
All DBs
Position
233497..234771
Genome browser
AA seq
424 aa
AA seq
DB search
MEKNRNKIAVSILLLLMAIPNFAQKITIQEAAEMAVKNNKDIKIGMLEMDRGQIDVSRSW
KQRFFTVSYNASANAYFKNIISKKTGEAYQQYLSLSQPLFTGGKLKLGNEISKDNLKLTE
LKLDKTKKDTVLSTVQAYIDVYEAVSTLGVLQKSKEALDENYKIQTEKYNLRMVTQPEYK
EAERSLKAMEAQIVEQQGNIEIAKESLGILIGVPNPSSIEIVPFGVEDNFTKTIDLKKDM
EKLTTQNTEYKIAQKQIDISRKNTKLERASFFPTINGTVNYGALGSRNKLKDVFEVKDFS
SAAGVTFTWNIFDWGKRKEDVKYAKKTEEIAEVKSEQTLEQVKANMRKTYYKLQALEKSL
EALKIAVESAEETYELEKERYNYNLITMNNLLDAEAKLRQSRVNYATSRLKYYYLVSQYG
AFLD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacagaaataaaatagcagtgtcaatattgctgttattaatggcaattccc
aattttgcacaaaaaataacaattcaggaagccgctgaaatggcggtaaaaaacaacaaa
gacataaaaataggaatgttagaaatggatagagggcaaattgatgtaagcagaagctgg
aaacagagattttttacagtaagctataatgcttcggcaaatgcttattttaaaaatatt
atttcgaaaaagacaggggaagcgtaccagcaatatctatcactctcacagccgcttttc
acaggcgggaaactaaaattaggaaatgaaataagcaaagacaacttaaaattaactgag
ctgaaattggataaaacaaagaaagatacagtattaagtactgttcaggcatatattgac
gtatatgaggcagtcagtacgcttggagtactgcaaaaatcaaaggaagcattggatgag
aattataaaattcagactgaaaaatataacttgagaatggttacacagcctgaatacaaa
gaagcagaaagaagtctaaaggctatggaagcgcaaattgtagaacagcaaggaaatatt
gaaatagcaaaagaatctttgggaatattaattggagtgccaaatccgagcagcattgaa
atagtgccgtttggagtggaagacaattttaccaagacaattgatttgaaaaaggatatg
gaaaaattaacaacacaaaatactgagtataaaattgcacaaaaacaaattgatataagc
agaaaaaatacaaaactggaaagagccagtttttttccaacaattaatggaactgtaaat
tacggggcattaggttcgagaaataaattaaaggatgtatttgaagtgaaggatttttca
tcggctgctggagtgacatttacttggaatatttttgactggggcaaaagaaaagaagat
gtaaaatatgctaaaaaaactgaagaaattgcagaagtaaaatcagagcagacattggag
caggttaaggcgaatatgagaaaaacatattataagctgcaagcgcttgaaaaaagtctg
gaagcattgaaaattgcagtggaaagtgcagaagaaacgtacgaactggaaaaagaaaga
tacaactataacttgataacaatgaataatttacttgatgcagaggcaaaattacgccag
agccgtgtaaattatgcaacttcaagacttaaatactactatcttgtatcacaatatgga
gcttttcttgattaa
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