Laribacter hongkongensis: LHK_01424
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Entry
LHK_01424 CDS
T00884
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family precursor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lhk
Laribacter hongkongensis
Pathway
lhk01501
beta-Lactam resistance
lhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHK_01424
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHK_01424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhk02000
]
LHK_01424
01504 Antimicrobial resistance genes [BR:
lhk01504
]
LHK_01424
Transporters [BR:
lhk02000
]
Other transporters
Pores ion channels [TC:
1
]
LHK_01424
Antimicrobial resistance genes [BR:
lhk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LHK_01424
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LHK_01424
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LHK_01424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FliJ
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
ACO74414
UniProt:
C1D7H4
LinkDB
All DBs
Position
complement(1377761..1379164)
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AA seq
467 aa
AA seq
DB search
MKAVLTTTCLALLLAGCAVGPDYRRPAVDVPSGFRFQQPDASDAALDTEWWKDFGDPVLD
GYVSEALEHNRNLAIAVANVDAAAAQLTIARASLFPTLDYQASASRGRSSSQQLLPGSQA
SNSFELLGSTSWQIDLWGALRRQTEAAQALLKASEQARRGVRLSVVSSTVQGYLQLRGLD
QQLAIARRTANSYADTVKLFELQYQYGAIARITLEQVRSQYQSALASIPPIEASIVQTEN
ALSLLLGRNPGPVVRGKPLAELRLPPVPGALPSSLLTRRPDILEAEARLVSANAKIGVAR
AQYFPQLTLNAGIGSLATRTGSLLTAGAGIWSVAGALAGSVFSGGATVGAVRSAEASTRA
AEQTYLQTIQQAFADVENALSGWQTSSQRLKSLEDLQASSREYADLAMLQYQGGIANYLT
VLDARRQLYSAEIDAASARTGYLSNAVAVYLALGGDWGTATQPQPTP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggtgctgacaacgacctgccttgccctgctgctggccggctgtgccgtcggg
ccggattaccggcgaccggcggtggatgttccctccggattccgcttccagcagccggat
gcctctgacgccgcactggacaccgagtggtggaaggacttcggcgatccggtactggac
ggttatgtcagcgaagcgctggagcacaaccgcaatctggccattgccgttgccaacgtc
gacgctgcggccgcccaactgaccattgcccgggcatccctgttccccacgctggattac
caagccagtgcaagccgggggcgcagcagcagccagcagctcctgccaggcagccaggcc
agcaacagcttcgagctgctgggcagcaccagctggcagatcgacctgtggggtgcactg
cgacgccagaccgaagcggcacaggccctgctgaaggccagcgaacaggcgcggcgcggc
gttcggctgtcggtggtgagttcgaccgtacagggctacctgcaattgcgggggctggac
cagcagcttgcaatcgccaggcggacggccaacagctacgccgacaccgtcaagctgttc
gagctgcaataccagtacggggccattgcccgcatcacgctggaacaggtccgcagccag
taccagtcagcgctggccagcattccgccgatcgaggcctcgatcgtgcagaccgaaaac
gccctctccctgctgctggggcgcaaccctggcccggtcgtgcgcggcaagccgctggcg
gaactccggctgccgccggttcccggcgcgctgccctccagcctgctgacccggcggccg
gacatcctggaggccgaagccaggctcgtgtcggccaatgccaaaatcggcgtggcccgg
gcccagtatttcccgcaactgaccctgaatgccggcatcggcagcctggccacccgcacc
ggcagcctgctgaccgcaggggccggcatctggagcgtggccggcgcgctggccggttcg
gttttctcgggtggtgccaccgtcggcgcagtcagaagtgccgaggcctcgacccgcgca
gccgaacagacctatctgcaaaccatccagcaggcctttgcagacgtcgaaaacgccctg
tccggctggcagacctcgtcgcaacgcctgaaatcccttgaagacctgcaagccagcagt
cgtgaatatgcggacctggccatgctgcaataccagggaggtatcgccaactacctgacc
gtgcttgatgcccggcgccagctgtattccgccgaaatcgacgcagcttcggcccgcacc
ggctatctgagcaatgccgtggcggtgtatctggcactgggtggcgactggggtactgcc
acgcagccccagccgacgccatga
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