Limnohabitans sp. INBF002: LINBF2_19110
Help
Entry
LINBF2_19110 CDS
T09962
Name
(GenBank) multidrug resistance protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi01501
beta-Lactam resistance
limi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LINBF2_19110
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LINBF2_19110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_19110
01504 Antimicrobial resistance genes [BR:
limi01504
]
LINBF2_19110
Transporters [BR:
limi02000
]
Other transporters
Pores ion channels [TC:
1
]
LINBF2_19110
Antimicrobial resistance genes [BR:
limi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LINBF2_19110
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LINBF2_19110
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LINBF2_19110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BDU53676
LinkDB
All DBs
Position
1932966..1934267
Genome browser
AA seq
433 aa
AA seq
DB search
MSFQAANAAWPAEQWWHAYGDAQLNALIEEAMAASPTLMAATARVQRADAMTQIAGSSTK
PQVSANASVSQDKLSTNYLTPKAVTPSGWNDYGRATVNLQWELDFWGKNRASLAAATSEL
QSGQAELAQVRLILASGIASHYAELSRLFALRDIAKRSVELHSQTSALVKQRLDRGLDTR
APLHEADAHRAEAESSVLALEEQIALQRNRLAALMGGGPDRGLSIVKPTLKLEHSFGLPT
ELAVNLLGRRPDVVAARLQAEAQASRIEQKKTEFYPNVNLNAFIGVQSLGIDMLSKDGSS
IGSVGPAISLPIFTGGRLRGELRGAQARYTEAVANYNAAIAHALQEVADAAVSQKALNQQ
TLKAQEAFEANSEAYHLTRLRYAAGLASAIELLSVENRRLQSQTELTHLRSVSFSLDIAL
KRALGGGFQTAQR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccaagcggccaatgccgcttggcctgccgaacagtggtggcacgcctacggc
gatgcacagctcaatgcactcattgaagaagccatggccgcctctcccaccctcatggcg
gccacagcccgcgtgcagcgcgctgatgcaatgacacaaattgcaggttcctctacaaag
cctcaggtcagtgcgaacgcatccgtcagtcaagacaagctgagcacaaactacttgacc
cccaaagctgtcacaccatcgggctggaacgactacggtcgcgccacggtgaacctgcaa
tgggagttggacttctggggcaaaaatcgcgcatcgcttgccgctgccacctcggaattg
caatctggacaagccgaattggcgcaagttcggttgatcctcgcttcgggcatcgccagc
cactacgccgagctgagtcgcttgttcgcgttacgtgacattgccaaaagatccgtcgag
ctgcacagccaaacaagtgctttggttaaacaacggctggacagaggcttagacacgcgt
gcccccctgcacgaagcagatgcccatcgcgccgaggcagaaagttcagtgctggcatta
gaagaacaaattgccttgcaacgcaaccgtctagccgcactgatgggcggaggtccagat
cgcgggctcagcattgtcaaaccaacactcaagctcgaacacagctttggcctgcccact
gaactcgcggtgaacttgttgggcagacgccccgatgtggtggctgcacgcctacaagcc
gaagcacaagccagccgcattgaacaaaagaaaactgagttctacccgaacgtcaactta
aatgcgttcattggtgtgcagtcgctcggtatcgacatgctgagcaaagacggttccagc
attggcagcgtaggccctgccatttctctgccgatcttcacaggcgggcgtttgagaggt
gaacttcggggcgcacaagcccgctacaccgaagccgtagcaaattacaacgccgccatt
gcacacgcactgcaagaggtggcggatgctgccgtcagccaaaaggcattgaaccaacaa
accttgaaagcgcaagaagcgtttgaagccaacagtgaggcctatcacctcacccgtctg
cgttatgcggcaggactggccagtgccatcgaacttctttcagtggaaaacagacgcctt
caaagtcaaaccgaattgacccatttacggtccgtgtctttctcgctcgacatcgcactc
aaacgcgccctgggcggtggatttcaaacagcccagcgttaa
DBGET
integrated database retrieval system
