Limnobacter profundi: HKT17_02405
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Entry
HKT17_02405 CDS
T06583
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
limn
Limnobacter profundi
Pathway
limn01501
beta-Lactam resistance
limn01503
Cationic antimicrobial peptide (CAMP) resistance
limn02020
Two-component system
limn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HKT17_02405
09132 Signal transduction
02020 Two-component system
HKT17_02405
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HKT17_02405
01503 Cationic antimicrobial peptide (CAMP) resistance
HKT17_02405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limn02000
]
HKT17_02405
02044 Secretion system [BR:
limn02044
]
HKT17_02405
01504 Antimicrobial resistance genes [BR:
limn01504
]
HKT17_02405
Transporters [BR:
limn02000
]
Other transporters
Pores ion channels [TC:
1
]
HKT17_02405
Secretion system [BR:
limn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HKT17_02405
RTX toxin transporter
HKT17_02405
Multiple protein transporter
HKT17_02405
RaxAB-RaxC type I secretion system protein
HKT17_02405
Antimicrobial resistance genes [BR:
limn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HKT17_02405
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HKT17_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJR28641
LinkDB
All DBs
Position
complement(513296..514693)
Genome browser
AA seq
465 aa
AA seq
DB search
MTQPDQPVPTRQKSGLKHLLFMTLLGLLGYSMLSNSAWAQNPTPQNLLTLYSLAKQNDPT
FRAAASQLQADLETENQAFSALLPNINFGARIEKQDNTYDAFGMSIDASRNPGTYSLVLN
QALFRPQAWETYKQSQLSGEVAKLSFQQAEQELVLRLTRAYFDLLTAQDDLASIRDQKTA
ITEQLALAKANFEVGSATVTDQQEAQARFDLAVAQELAAQNQLAQRKLQLETIVGLSVDE
LATLAPTTQLKAPTPNTAEAWAEQARNNNLKAQQARLAKLIAKGESNKAKYGHLPTLDLT
AQMVETEQQIFDGNSGRPFDLGVDSTTIGLVMNIPIFSGGGTQSQVRQQAALLEKAMNNV
ELAGRNATQAAKSAFLGVQTSLAQVKALETALASSELALQSNKTAYEVGIRINVDVLNAQ
QQFNATQRDLSKAKYTSLINMLELQAVAGQLNAETVQQINQLLVQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccgatcaacccgtgccaacgcgacagaaatcgggcctcaagcacttgctg
ttcatgactttgctgggattgctgggttactcaatgctcagtaattcggcatgggctcaa
aaccccacccctcaaaacctgctcacgctgtacagcctggccaaacaaaacgaccccacc
tttcgggcggcagcctcgcagttgcaggctgaccttgaaactgaaaaccaggcattttca
gctttgctgcccaatatcaactttggggcacgcattgaaaaacaagacaacacctacgat
gcgtttggtatgtcgattgacgccagccgcaatcccggcacctacagcctggtgctgaac
caggcactgtttcgccctcaagcctgggaaacctacaaacaaagccaattgagcggagaa
gttgccaagctcagctttcagcaagctgaacaggaacttgttttgcggttgactcgcgca
tatttcgatttattaaccgcgcaagacgacttggccagcattcgtgatcaaaaaacggcg
attactgaacaattggccttggcgaaagccaattttgaggtgggcagcgccaccgtcacc
gatcaacaagaggcacaagcccgatttgatctggccgtggcccaggaactggctgcccag
aaccagttggcccaacgcaagctacaactggaaaccatagtgggcctttcggtggatgaa
ctggccacacttgcacctacaacgcaacttaaagcacctacgccaaacaccgccgaggcc
tgggcagagcaggcccgcaacaacaacctgaaagcccagcaagcgcgacttgcaaaattg
attgccaaaggcgagagcaacaaggccaaatatgggcacttgcctacccttgacctgact
gcccaaatggttgaaaccgagcagcagatttttgatggcaacagtgggcgccccttcgac
ttgggagttgacagcaccacaattggcttggtgatgaacataccgattttcagcggtggt
ggcactcaaagccaggtgcgccagcaagctgcactgctggaaaaagcaatgaacaatgta
gaactggcaggcaggaatgccacgcaggctgcgaagtcagcattcttgggcgttcaaacc
agccttgcacaggtgaaagcacttgaaactgcacttgcctcgagtgaactggccctgcaa
tcgaataaaaccgcctatgaggtgggaatccggatcaatgtcgacgtattaaacgcccag
caacagttcaatgccacgcaacgtgacctctcaaaggccaaatacaccagcctgatcaat
atgcttgaactacaagcagtggccgggcaattgaatgctgaaacggtgcagcaaattaat
cagttactggttcagtaa
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