Lichenihabitans sp. PAMC28606: LGH83_04355
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Entry
LGH83_04355 CDS
T07621
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz01501
beta-Lactam resistance
liz01503
Cationic antimicrobial peptide (CAMP) resistance
liz02020
Two-component system
liz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LGH83_04355
09132 Signal transduction
02020 Two-component system
LGH83_04355
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LGH83_04355
01503 Cationic antimicrobial peptide (CAMP) resistance
LGH83_04355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_04355
02044 Secretion system [BR:
liz02044
]
LGH83_04355
01504 Antimicrobial resistance genes [BR:
liz01504
]
LGH83_04355
Transporters [BR:
liz02000
]
Other transporters
Pores ion channels [TC:
1
]
LGH83_04355
Secretion system [BR:
liz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LGH83_04355
RTX toxin transporter
LGH83_04355
Multiple protein transporter
LGH83_04355
RaxAB-RaxC type I secretion system protein
LGH83_04355
Antimicrobial resistance genes [BR:
liz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LGH83_04355
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LGH83_04355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UDL95462
LinkDB
All DBs
Position
complement(935002..936432)
Genome browser
AA seq
476 aa
AA seq
DB search
MLFKRSKQSGTVRFETTVAFSAVLFAAGLSAPASAESLNSFLTKAYVNNPQLNAQRAGTR
ASDENVPLANSGYLPKVSGTGSVGFTHSDAGVAGLAAGANSSLAGVNDTVPRGVGLTVTQ
TVFDGFKTPNSIRQAESNVFGSRETLRNTEQSVLQSAAQSYMDVLRDTAVLDLRSSNIKV
LDEQLRQTQDRFKVGEVTRTDVAQAEAGLAGSRADFYTAQSNLQNSIASFRQVVGVQPTR
LEPARPLERGLPPTLATAINISQVEHPSVQAALHQVDAAALQVKIAEGALFPTVSVQGSL
SQEYDVSNIPGSHAFVGAVVGSVSIPLYEGGADYATIRQAKETLTQSRLLADVQRENVRA
AVISAWGLLESSKATVTSDQASVNASEIALNGVREEARVGQRTTLDVLNAQQTLLNSRVA
LVGAQRDRVVASYAVLATIGRLSTTLLGLNVKQYNPVVHFEQVKDKWYGMRTPDGK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaagagatccaaacaatccggaacggtccggttcgagacgacagtcgcgttt
tccgcggtgctcttcgccgctggactgtcggcccccgccagcgcagaatcgctcaatagt
tttttgacgaaggcctacgtcaacaacccacaactcaatgcccagcgggcgggcacacga
gcatctgacgagaacgttcctctcgcaaactccggctacttgcctaaggtgagcggaacc
ggaagcgtcggcttcacacattcggatgcaggtgtggcgggtctcgcggctggcgcgaat
tcctcgctcgccggcgtaaacgatacggtcccgcgaggcgttggcctcactgtgacgcag
accgtgttcgatggtttcaagacaccgaactccattagacaggcggagtcgaatgtgttc
gggtcgcgcgagaccttgcggaacaccgagcaaagcgttttgcagagcgccgcgcagtcc
tatatggacgtgttgcgcgacacggcggtcttggatctgcgatcgagcaacatcaaggtc
ttggatgaacaactgcgccagacgcaggatcggttcaaggtcggtgaagtgacgcgaacc
gatgtggcccaggcggaagccggtctcgccggctcccgcgccgacttctacaccgcacag
tccaacctgcagaattcgatcgcgagcttccggcaggtggtcggcgttcagccgacgcgc
ctcgagcctgcgcgtccgctcgagcgcgggctgccgccgacgttggcgaccgcgatcaac
atctcccaggtcgagcatccatctgtccaggctgcgctgcatcaggtcgatgcggcggcc
ttgcaggtgaagattgccgaaggcgcgctctttccgaccgtcagtgttcaaggatcgctt
tcgcaggaatatgacgtcagcaatattccgggtagccatgcctttgttggcgcggtcgtg
gggtcggtcagcattccgctgtatgagggcggtgccgattacgcgacgatccgccaagcg
aaagagactctgacccagtcgcgtttgctggccgacgttcaacgcgaaaacgtccgagcc
gccgtcatctcggcttggggactgctggaatcctcaaaggcgaccgtgacctcggatcaa
gcgtcggtcaacgcatcggaaatcgcgctgaacggcgttcgcgaggaagctcgtgtcggc
caacgcaccactctcgacgtgctcaacgctcagcagaccttgttgaactcgcgcgtcgcg
ctcgtcggcgcgcagcgcgatcgcgtcgtcgcctcttacgccgtgctcgccacgatcggt
cgcctctcgacgaccctgcttggtcttaacgtcaagcaatataaccccgtggtgcatttc
gagcaggtcaaggacaagtggtacggcatgcggacgcccgacggaaaataa
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