Lagopus muta (rock ptarmigan): 125696069
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Entry
125696069 CDS
T09141
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125696069
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125696069
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
125696069
Peptidases and inhibitors [BR:
lmut01002
]
Metallo peptidases
Family M10
125696069
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Astacin
Reprolysin_4
Peptidase_M54
DUF4953
Peptidase_M66
Metallopep
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
125696069
NCBI-ProteinID:
XP_048807269
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All DBs
Position
1:180789479..180795507
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AA seq
466 aa
AA seq
DB search
MKVFSLLLLMYVTASSAFPVAPEEEDERKNIDLVETYLQNFYNLQKDHRHHLRQGGKNHL
AEKLKEMQEFFGLQVTGKADRDTLEMMNKPRCGVPDVEQYVFTAGNPKWKKTNLTYRIVN
YTRKMRQTDVDEAIQKALNVWSSVTPLTFQKIEDKIADIMISFAYRDHNDNSPFDGPNGL
LAHAFQPGEGLGGDVHMDDEETWTKDGRGYNLFIVVAHELGHSLGLSHSNDPGALMYPNY
AYTDPKEFLLPQDDIDGIQAIYGQSNDAVQPTGPTTPQVCDPNLTFDAITTLRGEMMFFK
GRYMLRKHPEWSETELNFISVFWPNLPSGIQAAYENIEKDEVLLFKEDKYWVIRGYDIAY
GYPKPIYRLGFPKTVKRVNAAYNDETTGKTYFFVADRYWRYDENKKSMDHGYPRKIISDF
GKIGRVDAAFQKDGYVYFFHRTKQFQFDPRTKRIVHQMKSISWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcttttctcttctcctcttgatgtatgtgacggcctcctccgctttccctgtg
gctcctgaagaagaagatgaaagaaaaaatatagatcttgtggagacttatctacagaat
ttctacaatcttcaaaaagatcatcggcatcatctaaggcaggggggtaaaaatcatctt
gctgaaaagctcaaggaaatgcaggaattctttggactacaagtgactgggaaagccgat
cgtgacactttggagatgatgaacaaacccaggtgtggtgttcctgatgtagagcaatac
gtcttcacagcagggaatccaaaatggaagaagactaatctgacatacaggattgtgaat
tacaccagaaagatgagacaaactgatgtagatgaagcaatccaaaaagctctgaatgtc
tggagtagtgtgacaccattgacatttcaaaagattgaggacaaaattgcagatataatg
atctcattcgcttatagagatcacaatgacaactctccttttgatggccctaatgggctg
ctggctcatgcttttcaaccaggagaaggtcttggtggagacgtgcatatggatgacgag
gaaacctggacaaaagatggaagaggctacaacttgttcattgttgttgcccatgaactt
ggccactcactgggcttgtcccattcaaatgatcctggagcactgatgtatccaaattat
gcttacacagaccccaaagaattccttcttcctcaggatgacattgatggcattcaagcc
atatatggacagtctaatgatgctgtgcagcctacagggcccacaactccacaagtctgt
gaccctaatttgacatttgatgccattaccactttgcgtggagaaatgatgttctttaag
ggcaggtacatgctgcgcaaacatcctgagtggtcagagacagagttaaattttatctca
gtgttctggccaaatttgccatcaggaattcaagctgcttatgagaacattgaaaaggat
gaagttttactctttaaagaggataagtactgggttatcagaggatatgacattgcatac
ggctatcccaaaccaatctatcgtttgggattcccaaagactgttaaaagagtgaatgca
gcttacaatgacgagaccacaggaaaaacatatttctttgtagctgacagatactggaga
tacgatgaaaacaaaaaatccatggatcatggttatcccaggaaaataatctctgacttt
ggaaaaattggcagagttgatgctgctttccagaaagatggctatgtgtacttcttccac
agaacaaagcagttccagtttgatcctcgcaccaaacggattgtccatcaaatgaagagc
attagctggtttaactgttaa
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