Lonsdalea populi: I6N93_15420
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Entry
I6N93_15420 CDS
T06954
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
lpop
Lonsdalea populi
Pathway
lpop01501
beta-Lactam resistance
lpop01503
Cationic antimicrobial peptide (CAMP) resistance
lpop02020
Two-component system
lpop03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I6N93_15420 (tolC)
09132 Signal transduction
02020 Two-component system
I6N93_15420 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6N93_15420 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
I6N93_15420 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_15420 (tolC)
02044 Secretion system [BR:
lpop02044
]
I6N93_15420 (tolC)
01504 Antimicrobial resistance genes [BR:
lpop01504
]
I6N93_15420 (tolC)
Transporters [BR:
lpop02000
]
Other transporters
Pores ion channels [TC:
1
]
I6N93_15420 (tolC)
Secretion system [BR:
lpop02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
I6N93_15420 (tolC)
RTX toxin transporter
I6N93_15420 (tolC)
Multiple protein transporter
I6N93_15420 (tolC)
RaxAB-RaxC type I secretion system protein
I6N93_15420 (tolC)
Antimicrobial resistance genes [BR:
lpop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
I6N93_15420 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
I6N93_15420 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QPQ23945
LinkDB
All DBs
Position
3489549..3490937
Genome browser
AA seq
462 aa
AA seq
DB search
MKKLLPLLIGLGLSGFSFMSQAEDLLQIYQQAKTTNPDLRSSAATRDAAFEKINEARSPL
LPQLGLGADYTYTSGFRDSKDVNNNVKSASLQLTQTLFDMSKWRALTLQEKQAGIEDVTY
QTAQQTLLLNSATAYFNVLRAIDSLSYVTAQKASIYRELDQTTQRYNVGLVAITDVQNAR
AQYDSVLASEVTARNALDNYMEVLRQVTGNVYPELASVNTANFAAQKPEPINTLMKTAES
RNLSLLSSRLSQDLAREQIRSSQTGYMPTLDLSASTGVSNTRYSGSRSAEGSFNDSDVGQ
NQVGLSFSLPLYSGGATNSQVKQAQHNYVAASENLESAHRSMVQTLRSSYNNISASISSI
AAYKQAVVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYDYLINQLNLK
YALGTLNENDLRALNATLGKPVSTTPAPTEDDSTRTVFAAGH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccctcttcttatcggcttgggtctgagcggcttcagctttatgagc
caggcggaagatctgctacagatttatcagcaggctaaaacgacaaaccccgatttacgc
agttctgcagcgactcgtgacgccgcctttgaaaaaatcaacgaagcgcgttctcccttg
ttgccgcaattaggtctgggtgcggattatacctataccagcggtttccgtgacagcaaa
gacgtgaataacaacgtgaagagcgcctcgctgcaactgacccaaaccctgtttgacatg
tccaagtggcgcgcgctgacgctgcaggaaaaacaggccggtatcgaagacgtcacctat
caaacagcgcagcaaacgctgctgctgaattccgccaccgcctattttaacgtgctgcga
gcgattgattcactgtcttacgtcaccgcccagaaagcctctatttatcgcgaactggat
caaaccactcagcgctataacgtcggtctggtcgccatcaccgacgtgcagaatgcccgt
gcacagtacgacagcgtgctggcgagcgaggtcaccgcccgcaatgcgctggacaactat
atggaagtgctgcgtcaggtgaccggcaacgtctatcctgaactggccagcgtgaatacc
gccaacttcgcggctcaaaaacccgagcctatcaatacgctgatgaaaacggcggaaagc
cgcaacctgagcctgttgtcctcccgtttgagccaggatctggctcgcgagcaaattcgt
tcctcgcagaccggttatatgccgacgttggatctatccgcctcaaccggcgtgagcaac
acccgttattccgggtctcgctcagcggaaggcagcttcaacgacagcgatgtcgggcag
aatcaggtcggcctgagtttctcccttccgctgtacagcggaggagcgaccaactctcag
gttaaacaagcgcagcataactatgtcgccgccagcgaaaatctggagagcgcgcaccgc
agcatggttcagaccctgcgttcgtcttacaacaacatctctgcgtccatcagcagcatc
gccgcctataagcaggccgtcgtttccgcgcaaagttctttagacgccatggaagccggt
tatcaggtagggacgcgcaccatcgttgacgttctggatgcgacaaccacgctgtataac
gcgaaacagcagctatccagcgcacgttacgactatctgattaaccagctgaacttgaaa
tatgcgctgggaacgctgaacgaaaacgatctgcgcgcgctgaacgccacgttgggcaaa
ccggtatccacgacaccggcgccgaccgaggacgacagcacccgcaccgttttcgcggcc
ggtcactga
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