Limnobaculum parvum: HYN51_06825
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Entry
HYN51_06825 CDS
T05491
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
lpv
Limnobaculum parvum
Pathway
lpv01501
beta-Lactam resistance
lpv01503
Cationic antimicrobial peptide (CAMP) resistance
lpv02020
Two-component system
lpv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HYN51_06825
09132 Signal transduction
02020 Two-component system
HYN51_06825
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN51_06825
01503 Cationic antimicrobial peptide (CAMP) resistance
HYN51_06825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpv02000
]
HYN51_06825
02044 Secretion system [BR:
lpv02044
]
HYN51_06825
01504 Antimicrobial resistance genes [BR:
lpv01504
]
HYN51_06825
Transporters [BR:
lpv02000
]
Other transporters
Pores ion channels [TC:
1
]
HYN51_06825
Secretion system [BR:
lpv02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HYN51_06825
RTX toxin transporter
HYN51_06825
Multiple protein transporter
HYN51_06825
RaxAB-RaxC type I secretion system protein
HYN51_06825
Antimicrobial resistance genes [BR:
lpv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HYN51_06825
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HYN51_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
VanW
DUF5420
Motif
Other DBs
NCBI-ProteinID:
AWH88297
UniProt:
A0A2Y9TX58
LinkDB
All DBs
Position
3064207..3065559
Genome browser
AA seq
450 aa
AA seq
DB search
MKKLLPLIIGLSLVGLSTSSYAENLIQVYQQAKSNNPDLRKSESDRDAAYEKISESRGAL
LPQLGLNAGYNINRGYRDNSGSKSDVTNGTLQLSQTIFDMSLWRQLNITEKQAGVQDVSY
QAQQQTLILDTATAYFNVLRSLDILSTTEAQKDALYRQLDQARQRFNVGLVAVTDVQNAQ
AQYDQTLADEVTARNNLENSLEVLRQITGMFYPELSSLDTARFSTNRPNNVNTLLQEAES
RNLNLLTARLAQDLSREQVKLQETGHMPTVAFTASSGLSNNDYRGTSTIGPEDSINGNTT
AGFTLSFPLFSGGQTSSRVKQAQYNYIGASEALESAHRSVVQIVRSSYNNVSASISSVNA
YKQTVVSAQSSLEATQAGYDVGTRTIVDVLNATTTLYNAKQQLSNARYDYLINQLNIKYA
LGTLNENDLDLLNKTLGKPNSTIPVINVKE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgcttcctttgattattggtcttagcctagttggccttagcacttcaagc
tatgccgaaaatttaatacaagtttaccaacaggctaaaagcaataaccctgacttacgt
aagtcagaatctgatcgtgatgcagcctacgaaaaaattagtgaatcccgcggtgccctg
ctgcctcaattaggattaaatgcaggttataatattaaccgtggttatcgtgacaacagc
ggcagtaaaagtgatgttaccaacggtactttgcaattaagccaaactatttttgatatg
tctttatggcgtcagcttaatatcactgaaaagcaagccggtgttcaggacgtttcctat
caggctcaacagcaaacgctgattctcgataccgctaccgcttattttaatgtattacgc
agtctggatattctttctactactgaagcgcagaaagatgcactttatcgtcagttagat
caggctcgtcaacgttttaacgtaggcttggttgcggttactgatgtgcaaaacgctcag
gcacaatatgaccagacgctagccgacgaagtgaccgcccgcaacaatctggaaaactct
ctggaagttcttcgccagattaccggaatgttctatccggaactgagctcgctggatacc
gctcgtttcagcacgaatcgtccgaataacgttaacacgcttctacaggaagcagaaagt
cgcaacctgaacctgttaactgctcgactggctcaggatttatcacgcgaacaggttaaa
ctgcaagaaacgggtcatatgccaaccgtagcatttaccgcatccagtgggttatcaaac
aatgactatcgtggtaccagcaccattggcccagaagatagtatcaatggtaacactacc
gctggctttactttgagtttcccactattcagtggtggtcaaacaagttcccgtgttaag
caggcgcaatataattatattggtgccagcgaagcgctagaaagtgcgcaccgctccgta
gtgcagatcgtacgttcttcttacaataacgtttctgcgtctatcagctcagtaaatgct
tataaacaaactgttgtttctgcccagagttcattagaagccactcaggcgggttatgat
gtaggtactcgtaccatcgtggacgtgttaaacgctacgactaccttatataacgctaaa
caacagctttctaacgcacgctatgattatctgattaatcagttaaacatcaaatatgcg
ttaggcacattgaacgaaaacgatttggatttactcaataaaacgctgggtaaaccaaac
tcgacgattccggtcattaacgttaaagaataa
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