Limnobacter thiooxidans: RGQ30_21310
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Entry
RGQ30_21310 CDS
T09704
Symbol
opmH
Name
(GenBank) efflux transporter outer membrane subunit OpmH
KO
K12340
outer membrane protein
Organism
lto
Limnobacter thiooxidans
Pathway
lto01501
beta-Lactam resistance
lto01503
Cationic antimicrobial peptide (CAMP) resistance
lto02020
Two-component system
lto03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RGQ30_21310 (opmH)
09132 Signal transduction
02020 Two-component system
RGQ30_21310 (opmH)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ30_21310 (opmH)
01503 Cationic antimicrobial peptide (CAMP) resistance
RGQ30_21310 (opmH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lto02000
]
RGQ30_21310 (opmH)
02044 Secretion system [BR:
lto02044
]
RGQ30_21310 (opmH)
01504 Antimicrobial resistance genes [BR:
lto01504
]
RGQ30_21310 (opmH)
Transporters [BR:
lto02000
]
Other transporters
Pores ion channels [TC:
1
]
RGQ30_21310 (opmH)
Secretion system [BR:
lto02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RGQ30_21310 (opmH)
RTX toxin transporter
RGQ30_21310 (opmH)
Multiple protein transporter
RGQ30_21310 (opmH)
RaxAB-RaxC type I secretion system protein
RGQ30_21310 (opmH)
Antimicrobial resistance genes [BR:
lto01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RGQ30_21310 (opmH)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RGQ30_21310 (opmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BET26630
UniProt:
A0AA86J7S1
LinkDB
All DBs
Position
2376965..2378263
Genome browser
AA seq
432 aa
AA seq
DB search
MLEAVKLAESKDPAHASIKANLAAAKLGPDVARAGLLPQVLVTANVANNKLEQDRTTLNG
GLITLGGTTDYDSNDVTARIIQPLFDLSAYRQYETSLLQKSRDEALAVDQVQRFRMQVVS
AYIDVLRAEAALKLAEGREQTLNKRLEDAKIRFKLGTLPKLDLLETQAQFDQTRSQRLTA
QNALETSKNVLASKVGTQQINLPPLKTNLPLIPFVPIDQKGWKALAQERSPSLVASRLDI
EVAEKERSSVQAGYLPQVNAVASVSQRDVSGGDNLAISLNSGRTEQVGVELRWELFGGGR
TTNRAKQLAQRNEALREDLRAGEINLGNRVGNLFTTAQNDAQRVKANSSAVASANASRNA
IEVGYKLGTHTILELLAAENRLQSARQEQDNAYFDYLQNSLNLHASSGVLYYSILARYGN
VFNLTSGKSETK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
ttgctggaagccgtcaaactggccgagtcgaaagaccctgctcacgcctccatcaaagcc
aatctcgccgccgcaaagctggggccggatgtcgcacgcgcaggtctgttgccgcaggtt
ttggtgacggccaatgtggccaacaacaagctggagcaagaccgaacaaccttgaatggc
ggcctgatcaccttgggcggcaccaccgattacgattcaaacgatgtcaccgcccgcatc
attcaacccctgtttgacctgtctgcctatcggcaatacgaaacctccctgcttcaaaaa
tcaagagatgaagcactcgcggtggatcaagtgcagcgctttcgcatgcaggttgtatcg
gcttacattgatgtattgcgggccgaagccgcattgaagttggccgagggccgtgagcaa
acgctgaacaaacgcctggaagatgcaaaaattcgcttcaagctgggcacactcccaaag
ttggacctgctggaaacacaggcccagtttgatcaaacccgaagccagcggctgacagca
caaaacgccctggaaaccagcaagaatgtgttggccagcaaggtgggtacacagcaaatc
aacttgcctcccctgaaaaccaatttacccctgattccgtttgtacccatcgaccagaaa
ggctggaaggctctggcccaggaaagaagcccttccctcgtggccagcaggcttgatatt
gaagtagctgaaaaagaacgaagctcggtgcaggccggctacctgccgcaagtgaatgca
gtggcatccgtgagccagcgcgatgtttccggaggggacaacctggccatcagcctgaac
agtggccgaaccgagcaggttggcgtggagcttcgctgggaattgttcgggggtggtaga
accaccaaccgggccaagcaactggctcagcgcaacgaagcattgcgagaagaccttcga
gccggggagatcaacctgggcaaccgggttggcaacttgttcaccacagcacagaacgac
gcgcaacgtgtcaaggccaacagcagcgcagtggcttcggccaacgcatcacgcaacgca
attgaagtgggttacaaactgggcacccacaccatacttgaattgctcgctgcagaaaac
aggcttcaaagcgccaggcaggaacaggacaacgcctacttcgactaccttcaaaacagc
cttaatctgcatgccagctcgggtgtgttgtactacagcatacttgcgcgatatggcaat
gtgttcaatctgacttcaggcaaaagcgaaaccaagtag
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