Limimaricola variabilis: T8T21_06870
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Entry
T8T21_06870 CDS
T09625
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr01501
beta-Lactam resistance
lvr01503
Cationic antimicrobial peptide (CAMP) resistance
lvr02020
Two-component system
lvr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
T8T21_06870
09132 Signal transduction
02020 Two-component system
T8T21_06870
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T8T21_06870
01503 Cationic antimicrobial peptide (CAMP) resistance
T8T21_06870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_06870
02044 Secretion system [BR:
lvr02044
]
T8T21_06870
01504 Antimicrobial resistance genes [BR:
lvr01504
]
T8T21_06870
Transporters [BR:
lvr02000
]
Other transporters
Pores ion channels [TC:
1
]
T8T21_06870
Secretion system [BR:
lvr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
T8T21_06870
RTX toxin transporter
T8T21_06870
Multiple protein transporter
T8T21_06870
RaxAB-RaxC type I secretion system protein
T8T21_06870
Antimicrobial resistance genes [BR:
lvr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
T8T21_06870
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
T8T21_06870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
HH_EMRA
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WPY95835
LinkDB
All DBs
Position
complement(1400462..1401850)
Genome browser
AA seq
462 aa
AA seq
DB search
MRRLIGSLVLGAGLAAVSLGAARADTLASALAHGYEHSGLLDQNRALLRAADEDVAQALA
TLRPILSWSAQTALSTSSQRRDSASGVVGVDSFDVSSQVSLTASLLLYDGGQTRYGLDSQ
KALVLSTRERLRQIEQQVLQRVVEAYMEVRRAAAFVELRQNNLQLITQELRAAQDRFEVG
EITRTDVSLAEAQLASARSQLAADEGQLAQARAEFRAAVGRAPGPLGAVPDARIPGSLAE
AQAIARREHPSILEAQHSISVAEINIAAAEAAKRPTVSLSGTLTVDDEFEDSQQIGITAN
QTLYSGGRIASQVRQAKARRDAARGALINTSRTIDRNVENAYALLAVARASIEASGREVR
AAQVAFDGLREEARLGARTTLDVLNAEQDLLDARATLASAQIDETLATYVVLASIGRLTA
EQLGLAVQVYDPVAYYNLVRNAPSSTSEQGKALDRVLDAIGR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtttgattggaagcttggttctcggcgccggtctggccgccgtgagcctcgga
gcggcgcgggccgacaccttggccagcgcgctggcgcatggctacgagcatagcggcctg
ctcgaccagaaccgggcactgctccgcgcggccgacgaggatgtcgcgcaggcgctggca
acgctgcggcctatcctgagctggtcggcacaaaccgcgctctccaccagcagccagcgg
cgcgacagcgcctcgggcgttgtcggtgtggacagcttcgacgtctcctcgcaggtttcg
ctgaccgcctcgctgctgctctatgacggcggccagacccgctacggcctcgattcgcaa
aaggcactggtgctatcgacgcgcgagcggctgcgccagatcgagcagcaggtgctgcag
cgggtcgtcgaggcctatatggaagtgcgccgcgccgccgccttcgtcgaactgcgccag
aacaacctgcagctcatcacccaggaactgcgcgcagcccaagaccggttcgaggttggc
gaaatcacccgtaccgacgtctcgctcgccgaagcgcagctcgcgtcggcccgcagccag
ctcgccgccgatgagggccagctcgcccaggcgcgcgccgagttccgcgccgccgtcggc
cgcgcccccggtccgctcggggcggttccggatgcccggatccccggcagccttgccgag
gcgcaggcgatcgcacggcgcgagcatccctcgatcctcgaggcccagcattccatctcg
gtggccgagatcaacatcgccgcggccgaggccgccaagcggccgaccgtgtcgctcagc
ggcaccctgacggtcgatgacgaattcgaggacagccagcagatcggcatcacggcaaac
cagacgctctattctggtggccggatcgccagccaggtgcgccaggccaaggcccggcgt
gacgctgcccggggcgccctgatcaacaccagccgtaccatcgaccgcaacgtcgagaat
gcctatgcgctgctggccgtggcgcgggccagcatcgaagcctcgggccgcgaggttcgg
gcggcgcaggtggccttcgacggcctgcgcgaagaggcccgcctcggggcgcggaccacg
ctcgacgtgctcaacgcggagcaggacctgctcgacgcgcgcgccacgcttgcctcggcg
cagatcgacgagactctggcgacctatgtcgttctggcctcgatcggccggctgacggcg
gagcagctggggctcgcggtgcaggtctatgacccggtcgcgtattacaacctcgtgcgc
aatgcgccgtcgagcacctccgagcagggcaaggccctcgaccgcgtgctggacgccatc
ggacgttaa
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