Pseudoduganella armeniaca: C9I28_20225
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Entry
C9I28_20225 CDS
T05378
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
masz
Pseudoduganella armeniaca
Pathway
masz01501
beta-Lactam resistance
masz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C9I28_20225
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C9I28_20225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_20225
01504 Antimicrobial resistance genes [BR:
masz01504
]
C9I28_20225
Transporters [BR:
masz02000
]
Other transporters
Pores ion channels [TC:
1
]
C9I28_20225
Antimicrobial resistance genes [BR:
masz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C9I28_20225
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
C9I28_20225
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
C9I28_20225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AVR97704
UniProt:
A0A2R4CDH3
LinkDB
All DBs
Position
complement(4640422..4641807)
Genome browser
AA seq
461 aa
AA seq
DB search
MKTFFRLTAVAACAALTGCAAGPRYETPIAANPAQFKEAAGWVPAAPADALERGPWWTLF
GDATLNELAARVDVNNQNVAAAVASYAQARAVVAEQRAALFPVVSLNGSGTRSGGGESRA
ASNYRVNIGGSWEPDVWGRLRAGVTGAQASAQASAAELASARLSAQGELVANYIGLRQTD
AQLALLNTTVEGYQRVLQITQNRFNAGITARSDLLQAQTQLANTQAEQLSLVRQRALYEH
AIAILLGQAPAEFSLPAAPWTLAIPEVPVGVPSALLQRRPDIAAAERRVAVANEQIGIAR
AAYFPSLSLSASYGYGASQTAGLFNASNNLWSLGVSAAQAIFNAGAISARVEQTRAARDV
AIAQYRQTVLNAFADVEDQLAATRALAQQQDLRRAASEAADQVEQQMINRYRAGQVSYTE
VVNAQVTALSARRALVQVQADRQTTAVALIQALGGGWHATE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttctttcgcctcaccgccgtcgccgcctgcgctgccctgaccgggtgcgcg
gccggccctcggtatgaaacgcccatcgccgccaatccggcgcagttcaaggaagccgcc
ggctgggtgcccgccgcgccggccgatgcgctcgaacggggaccgtggtggaccttgttc
ggcgatgcgaccctgaacgaactggcggcgcgcgtcgacgtcaacaaccagaacgtggcc
gccgccgtcgcctcgtacgcccaggcgcgcgccgtggtggccgagcagcgtgcggccctg
ttcccggtcgtcagcctgaacggctccggcacccgttcgggcggcggcgagagccgcgcc
gccagcaactaccgcgtcaatatcggcggcagctgggagccggacgtgtggggccggctg
cgcgccggtgtcacgggcgcgcaggccagcgcccaggccagcgcggcggaactggcgtcg
gcgcggctgtccgcgcagggcgagctggtggccaactacatcggcctacgccagaccgac
gcgcaactggcgctgctgaacaccacagtcgaaggctaccagcgcgtgctgcagatcacc
cagaaccgcttcaatgccggcatcacggccaggtccgacctgctgcaggcgcagacgcag
ctggccaatacccaggccgaacaactaagcctggtgcgccagcgcgcgctgtacgagcac
gccatcgccatcctgctgggccaggcgccggcggagttctcgctgccggccgcgccgtgg
acgctggcgataccggaggtgccggtcggcgtgccgtccgcgctgctgcagcgccgcccg
gatatcgcggcggcggaacggcgcgtggccgtcgccaacgagcagatcggcatcgcccgc
gccgcctacttcccgtcgctcagcctgtccgcctcgtacggctacggcgccagccagacg
gcggggctgttcaatgcgtcgaacaacctgtggtcgctgggcgtctcggccgcacaggcc
atcttcaacgccggcgcgatctcggcgcgggtcgagcagacccgtgccgcgcgcgacgtc
gccatcgcccaataccgccagacagtgctgaacgcgtttgccgacgtcgaggaccagctg
gccgccacgcgcgcgctggcgcagcagcaggacctgcgccgcgccgcatcggaggcggcc
gaccaggtcgagcagcaaatgatcaaccgctaccgtgccggccaggtcagctacacggag
gtcgtcaacgcccaggtcacggccttgtcggcccggcgggccctcgttcaggtgcaggcc
gaccggcagaccaccgccgtggcgctgatccaggcgctggggggcgggtggcacgcaacg
gagtaa
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