Mus caroli (Ryukyu mouse): 110283690
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Entry
110283690 CDS
T05910
Name
(RefSeq) class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like isoform X3
KO
K06751
MHC class I antigen
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04144
Endocytosis
mcal04145
Phagosome
mcal04218
Cellular senescence
mcal04514
Cell adhesion molecules
mcal04612
Antigen processing and presentation
mcal04940
Type I diabetes mellitus
mcal05163
Human cytomegalovirus infection
mcal05165
Human papillomavirus infection
mcal05166
Human T-cell leukemia virus 1 infection
mcal05167
Kaposi sarcoma-associated herpesvirus infection
mcal05168
Herpes simplex virus 1 infection
mcal05169
Epstein-Barr virus infection
mcal05170
Human immunodeficiency virus 1 infection
mcal05203
Viral carcinogenesis
mcal05320
Autoimmune thyroid disease
mcal05330
Allograft rejection
mcal05332
Graft-versus-host disease
mcal05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110283690
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110283690
04145 Phagosome
110283690
09143 Cell growth and death
04218 Cellular senescence
110283690
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
110283690
04612 Antigen processing and presentation
110283690
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110283690
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110283690
05170 Human immunodeficiency virus 1 infection
110283690
05168 Herpes simplex virus 1 infection
110283690
05163 Human cytomegalovirus infection
110283690
05167 Kaposi sarcoma-associated herpesvirus infection
110283690
05169 Epstein-Barr virus infection
110283690
05165 Human papillomavirus infection
110283690
09163 Immune disease
05320 Autoimmune thyroid disease
110283690
05330 Allograft rejection
110283690
05332 Graft-versus-host disease
110283690
09166 Cardiovascular disease
05416 Viral myocarditis
110283690
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
110283690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110283690
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mcal00537
]
110283690
Exosome [BR:
mcal04147
]
Exosomal proteins
Proteins found in most exosomes
110283690
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mcal00537
]
Antigens
110283690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_2
C2-set_3
Ig_3
ig
Ig_2
MHC_II_beta
PTCRA
Motif
Other DBs
NCBI-GeneID:
110283690
NCBI-ProteinID:
XP_021004774
Ensembl:
MGP_CAROLIEiJ_G0021548
UniProt:
A0A6P5NVF4
LinkDB
All DBs
Position
17:complement(33083947..33092154)
Genome browser
AA seq
362 aa
AA seq
DB search
MWALIFWLLSHPQDGGAWSHSLHYCYSAVTEPGPGVPSFSASGFLDNQPFIHYDSRSRKA
KPCADWLRENAQYFTHETEVFTNRMKIFQLSLRNIQQYYNSSGTQSQRADGFHQQAGPHT
LQFTYGCEMRDNRTTGHWQYGYDGRDYLTLDLDSMQYIAATFIADYTKRKWQNNEYWLEK
EKTYLEKECILWLQRYLTMGGENFTRTDPPKTIVTHQLKPERDVTLRCWALGFYPADITL
TWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPSGEEQRYTCHVQHEALTQPLVLKWE
PLQLTTPTTGVCARGRCRPQATLLSVLAFPLFGIVLFGLICYRTQVRRKNWPAPSVPEEE
RL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctcttatcttctggcttctgagtcacccccaggacggcggagcctggtcccac
tctctgcattactgttactcagctgtgactgagccgggcccgggagttccttcattttcc
gccagtggcttcttagataaccagcccttcatccactacgacagcaggagcaggaaggca
aagccttgtgctgactggctgagggaaaatgcacagtacttcactcacgagacggaggtt
ttcaccaatcggatgaagattttccagttgagcctgagaaacattcagcaatactacaac
agctctggtacccagagtcagagagcagatggcttccaccagcaagcaggccctcacacc
ctccagttcacatacggctgtgagatgcgggacaacaggaccacagggcactggcagtat
ggctacgatggcagggattacctgaccttggacttggactctatgcaatatatagcagcc
accttcattgctgactacaccaagcgcaagtggcaaaacaatgagtactggctggagaaa
gagaagacctacttggagaaggagtgcatcctatggctgcagagatacttaaccatggga
ggagagaactttacacgaactgacccgccaaagacaatagtgactcatcagctcaaacct
gaaagagacgtcaccctaaggtgctgggccctgggcttctaccctgctgacatcaccctg
acctggcagttgaatggggaggagctgacccaggacatggagcttgtggagaccaggcct
gcaggggatggaaccttccagaagtgggcatctgtggtggtgccttctggagaggagcag
agatacacatgccatgtacaacatgaggcactaacccagccccttgttctgaaatgggag
cctcttcagctcaccacacccacgacaggagtatgtgctaggggaagatgtcgtcctcaa
gcaaccttgctgagtgtccttgcatttcctttatttggcatagtactgtttggacttatc
tgctacagaactcaggtcagaagaaagaactggcctgctccatctgttcctgaagaagag
aggctctag
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