Mus caroli (Ryukyu mouse): 110285741
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Entry
110285741 CDS
T05910
Symbol
Hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110285741 (Hps6)
Membrane trafficking [BR:
mcal04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
110285741 (Hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
110285741
NCBI-ProteinID:
XP_021007784
Ensembl:
MGP_CAROLIEiJ_G0023024
UniProt:
A0A6P5NZT4
LinkDB
All DBs
Position
19:42653903..42656579
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AA seq
805 aa
AA seq
DB search
MKRAGTLRLLSDLSNFTGAARLRELLAGDPAVLVRCSPDGRHLLLLRPPGSPAPQLLVAV
RGPGLPLERAWPEGDPSPLDVFFVPWLARPALILVWESGLAEVWGVGMDPGWKLLQSTEL
CPDGGARVMAVAATRGRLVWCEERQPGVKDQPEQLSTAFSHRVCFKTLETSGEAGTKLGC
THILLHHCPFFGLIASRKDLFLVPTTNTWSGVAHVLLIWSPSKGKVIVAAPSLGLSHSKS
LNPKQGDTWDFRTLLRGLPGFLSPREPLAVHTWAPSSQGLLLLDLKGKVSLVQCHGGTRT
VGILQEAPVSLKGSAALGTFHGTLACVLGSTLELLDMSSGRLLERKVLSTDRVHLLEPPA
PGMKNEEELETRGALRLLSALGLFCVCWETPQGLELPSDKDLVFEEACGYYQRRSLRGTQ
LTPEELRHNSMFRAPQALASILQGHLPPSTLLTTLRAELRDYRSIEQLKAQLVAGDDEEA
GWTELAEHEVARLLRTQLTGDQLAQFNTIFQALPTAAWGATLQALQLQPDRSGRLRSQAP
PDVWKKVLRAPTGGKEHPNGILPPFELLCQCLGQLEPQWLPPFVKLAQQQGGPGWGAEGP
SLPLYRRALSVLGEEGKRPEALELELLLGSGRPKAVLQAVRQLIKKEEWERALEAGLALD
ASSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCPPEVAPHELLLLLRTHLPDDEGTTP
FPEPGAKPPLTVGLVRALLEQTGAQGRPSGPVQSTYEDILWDPGTPPPTPPRGPTAALQA
SDHPGQEAWVPSGQGLGAADVGVHL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcaggaactctgcgcctgctttcggatctgagcaacttcaccggcgcggcc
cggctccgcgagttgttggcgggggacccagctgtcctagtccgctgcagccctgacggc
cgccacttgctgctgttaagaccccccgggtcgcccgccccgcaacttctagtggctgtg
cgtgggcccggcctgccgctggagcgtgcctggccggagggcgacccctcgccgctggac
gtctttttcgtgccgtggctggcgcgacccgcgctgatcttggtatgggagagtggccta
gcagaggtgtggggcgtggggatggaccctggatggaagctacttcagagcactgagctg
tgtccggatggtggagcccgcgtgatggccgtggccgcaacccgaggccgcctagtttgg
tgcgaggagcgtcagccgggtgttaaggaccaaccagagcagctttcaacggccttcagc
caccgtgtgtgcttcaagaccctggaaaccagcggggaggctggcaccaaactaggctgc
acccacatcctgctacaccattgccccttttttggactgatagcctcccgcaaggacctc
ttcctggtgcctactaccaacacttggtctggtgtggcccacgttctgctcatctggagc
ccaagcaagggaaaggtaatagttgcagctccatctcttggtctttcacacagtaaaagc
ctgaatcccaaacaaggggacacttgggacttccggaccctgcttcgaggccttcctgga
ttcctgtcccccagggagccactggctgtacacacttgggccccatcttcacagggcttg
ttgttgcttgacttgaaagggaaggtgagcctagtacagtgccatggtggtactcgaacc
gtgggaatcctgcaggaggcccctgtaagcctaaaagggtctgcagccctggggacattt
cacggcactttagcctgtgtcctgggctccaccttggaactactagacatgagcagtggg
cggctgttggaaagaaaggttctcagtacagacagagtacatctgctggaacctccagcc
ccaggcatgaagaacgaggaagagctggagacccgaggagccctgagattgctttcagcc
ttgggtctcttttgtgtgtgttgggaaactccccaaggccttgagctgccttcagacaag
gacctggtgtttgaggaggcctgtgggtactaccagcgtcggagccttcgaggtacccag
cttaccccagaagaactgagacacaacagcatgtttcgggcacctcaggccctggcctct
atcctccagggccacctgcccccgtctacactcttgacaactctgagggctgaactccgg
gattatcgtagtatagaacagctcaaggcccagctggtggctggggacgatgaggaggct
ggctggactgagttagcagagcacgaggtggcccgcctgctgagaacccagttgacagga
gaccagctggcccaattcaacaccattttccaagcccttcctacagcagcttggggtgcc
accctccaggcactgcagctccagccagataggagtggcaggctgaggtcccaagcaccc
ccggatgtatggaagaaggtcctaagggctccaacaggtggaaaggaacatcccaatgga
atactgccgccctttgaactcctgtgtcagtgcctgggccagctagagcctcagtggctc
cccccatttgtgaaactggcacagcagcagggtggcccaggctggggggctgaaggcccc
agtctgcccctttaccgccgagccctgtcagtgttaggtgaggaagggaagaggcccgag
gctctggaactcgagctgcttttgggcagtgggcgacccaaagccgtactacaagctgta
aggcagctgataaagaaagaagagtgggaacgggctctggaggccggcctggccctggat
gcctccagccccctgcttcgaagtgagatctttaagctgctgctggcagagtttgcccag
caccgccgcctggatgcacacctccctctcctctgtcgactgtgcccaccggaagtggct
ccacatgagctcctacttctgctgaggacacatctcccagatgatgagggaaccacccct
ttccctgagcctggggcaaagccccctctcacagtgggcttggtcagagccctgctagaa
cagactggggctcaaggaaggccctctggcccagttcaaagcacctatgaggacatctta
tgggacccaggcactccaccccctacgccacctcgtggacccactgctgctctccaggca
tcagaccatccaggacaggaagcctgggtaccatctggacaagggctcggtgcagctgat
gtgggagttcatttgtag
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