Mus caroli (Ryukyu mouse): 110286673
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Entry
110286673 CDS
T05910
Symbol
Cacna1f
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04010
MAPK signaling pathway
mcal04020
Calcium signaling pathway
mcal04022
cGMP-PKG signaling pathway
mcal04024
cAMP signaling pathway
mcal04260
Cardiac muscle contraction
mcal04261
Adrenergic signaling in cardiomyocytes
mcal04270
Vascular smooth muscle contraction
mcal04723
Retrograde endocannabinoid signaling
mcal04725
Cholinergic synapse
mcal04726
Serotonergic synapse
mcal04727
GABAergic synapse
mcal04911
Insulin secretion
mcal04912
GnRH signaling pathway
mcal04921
Oxytocin signaling pathway
mcal04924
Renin secretion
mcal04925
Aldosterone synthesis and secretion
mcal04927
Cortisol synthesis and secretion
mcal04929
GnRH secretion
mcal04934
Cushing syndrome
mcal04935
Growth hormone synthesis, secretion and action
mcal05010
Alzheimer disease
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05207
Chemical carcinogenesis - receptor activation
mcal05410
Hypertrophic cardiomyopathy
mcal05412
Arrhythmogenic right ventricular cardiomyopathy
mcal05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110286673 (Cacna1f)
04020 Calcium signaling pathway
110286673 (Cacna1f)
04024 cAMP signaling pathway
110286673 (Cacna1f)
04022 cGMP-PKG signaling pathway
110286673 (Cacna1f)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
110286673 (Cacna1f)
04929 GnRH secretion
110286673 (Cacna1f)
04912 GnRH signaling pathway
110286673 (Cacna1f)
04921 Oxytocin signaling pathway
110286673 (Cacna1f)
04935 Growth hormone synthesis, secretion and action
110286673 (Cacna1f)
04924 Renin secretion
110286673 (Cacna1f)
04925 Aldosterone synthesis and secretion
110286673 (Cacna1f)
04927 Cortisol synthesis and secretion
110286673 (Cacna1f)
09153 Circulatory system
04260 Cardiac muscle contraction
110286673 (Cacna1f)
04261 Adrenergic signaling in cardiomyocytes
110286673 (Cacna1f)
04270 Vascular smooth muscle contraction
110286673 (Cacna1f)
09156 Nervous system
04727 GABAergic synapse
110286673 (Cacna1f)
04725 Cholinergic synapse
110286673 (Cacna1f)
04726 Serotonergic synapse
110286673 (Cacna1f)
04723 Retrograde endocannabinoid signaling
110286673 (Cacna1f)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
110286673 (Cacna1f)
09164 Neurodegenerative disease
05010 Alzheimer disease
110286673 (Cacna1f)
05020 Prion disease
110286673 (Cacna1f)
05022 Pathways of neurodegeneration - multiple diseases
110286673 (Cacna1f)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
110286673 (Cacna1f)
05412 Arrhythmogenic right ventricular cardiomyopathy
110286673 (Cacna1f)
05414 Dilated cardiomyopathy
110286673 (Cacna1f)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
110286673 (Cacna1f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110286673 (Cacna1f)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110286673 (Cacna1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
110286673
NCBI-ProteinID:
XP_021008869
Ensembl:
MGP_CAROLIEiJ_G0032887
UniProt:
A0A6P5NZ13
LinkDB
All DBs
Position
X:1748858..1776792
Genome browser
AA seq
1979 aa
AA seq
DB search
MSESEVGKDTTPEPSPANGTGPGPEWGLCPGPPTVGTDTSGASGLGTPRRRTQHNKHKTV
AVASAQRSPRALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDS
NTANHNLEQVEYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLL
EQGPGRPGDAPHTGGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHI
ALLVLFVIIIYAIIGLELFLGRMHKTCYFLGSDMEAEEDPSPCASSGSGRSCTLNHTECR
GRWPGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGS
FFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLRGYLDWITQAEELDLHDPS
VDGNLASLAEEGRAGHRPQLSELTNRRRGRLRWFSHSTRSTHSTSSHASLPASDTGSMTD
TPGDEDEEEGTMASCTRCLNKIMKTRICRHFRRANRGLRARCRRAVKSNACYWAVLLLVF
LNTLTIASEHHGQPVWLTQTQEYANKVLLCLFTVEMLLKLYGLGPSVYVASFFNRFDCFV
VCGGILETTLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLL
LLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWNVVMYDG
IMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDAGTAKDKGREKSSEG
NPPKENKVLVPGGENEDAKDTSEGAAPGMEEEEEEEEEEEEENGAGHVELLQEVVPKEKV
VPIPEGSAFFCLSQTNPLRKACHTLIHHHIFTSLILVFIILSSVSLAAEDPIRAHSFRNH
ILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLISFGIHSSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLF
KGKFYSCTDEAKHTLKECKGSFLIYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTV
STFEGWPALLYKAIDANAEDEGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVIITFRA
QGEQEYQNCELDKNQRQCVEYALKAQPLRRYIPKNPHQYRVWATVNSAAFEYLMFLLILL
NTVALAMQHYEQTAPFNYAMDILNMVFTGLFTIEMVLKIIAFKPKHYFADAWNTFDALIV
VGSVVDIAVTEVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIK
SFQALPYVALLIAMIFFIYAVIGMQMFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATG
EAWQEIMLASLPGNRCDPESDFGPGEEFTCGSSFAIVYFISFFMLCAFLIINLFVAVIMD
NFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGKLCPHR
VACKRLVAMNVPLNSDGTVTFNATLFALVRTSLKIKTEGNLDQANQELRMVIKKIWKRIK
QKLLDEVIPPPDEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGREAPTSTSSALQAGLR
SLQDLGPEIRQALTYDTEEEEEEEEAVGQEAEEEEAENNPEPYKDSIDSQPQSRWNSRIS
VSLPVKEKLPDSLSTGPSDDDGLAPNSRQPSVIQAGSQPHRRSSGVFMFTIPEEGSIQPK
GTQGQDNPNEEQEVPDWTPDLDEQAGTPSNPVLLPPHWSQQHVNGHHVPRRRLLPPTPAG
RKPSFTIQCLQRQGSCEDLPIPGTYHRGRTSGPSRAQGSWAAPPQKGRLLYAPLLLVEES
TVGEGYLGKLGGPLRTFTCLQVPGAHSNPSHRKRGSADSLVEAVLISEGLGLFAQDPRFV
ALAKQEIADACHLTLDEMDSAASDLLAQRATSLYSDEESILSRFDEEDLGDEMACVHAL
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatctgaagtcgggaaagatacaaccccagagcccagtccagccaatgggact
ggccctggccctgaatgggggctctgtcctgggcctccaactgtggggactgataccagc
ggggcgtcaggcctggggaccccaagaagaaggacccagcacaacaaacacaagactgtg
gcggtggccagtgctcagagatcacctcgagcactcttctgcctcacccttaccaatccc
attcgtcggtcctgcatcagcattgtagagtggaagccttttgatattctcatcctcctg
acaatctttgccaactgcgtggcattgggggtatatatccccttccctgaggacgactcc
aacactgctaaccacaacttggaacaggtagaatacgtgttcctggtgattttcaccgtg
gagacagtgctcaagatcgtagcctatgggctggtgctccatcccagcgcctatattcgc
aatggctggaacctgctcgacttcatcatcgtcgtggtcgggctgttcagcgtgctgctg
gagcaaggacctgggcggccaggagatgccccgcatactggaggaaagccaggaggcttc
gatgtaaaggcactgcgggcatttagggtgctacgaccactaaggctagtgtctggggtc
ccgagtctgcacatagtgctcaattccatcatgaaggcgcttgtgccgctgctgcacatt
gccctgttggtgctcttcgtcattatcatttacgccatcatcggactcgagctgttcctc
ggacgaatgcacaagacatgctacttcctgggatctgatatggaagcagaggaggaccca
tcaccttgtgcatcttctggctctgggcgttcatgcacactgaaccataccgagtgccgc
gggcgctggccaggacccaacggtggcatcacgaacttcgacaattttttctttgccatg
ctaactgtgttccagtgtattaccatggaaggctggacagacgtcctctactggatgcag
gatgccatggggtatgagctgccttgggtgtactttgtgagccttgtcatctttgggtcc
ttctttgtcctcaaccttgtgcttggagtcctaagtggggagttctccaaggaaagagaa
aaggcaaaagcccgaggtgactttcagaagcttcgggagaagcagcagatggaagaagac
cttcggggctacctggactggatcacacaggctgaggagttagaccttcatgacccctca
gtagacggcaacttggcttctcttgctgaagagggacgggcgggccaccggccacaactg
tcagagctgaccaataggaggcgcggacggctgcgatggttcagccactctactcgctcc
acacactccaccagcagccatgccagcctcccagccagtgacactggctccatgacagac
acccccggagacgaggatgaagaggaggggaccatggctagctgtacacgctgcctaaac
aagattatgaaaaccaggatctgccgccacttccgccgagccaaccggggtctccgtgca
cgctgccgccgggcggtcaagtccaacgcctgctactgggctgtattgttgctcgtcttc
ctcaacacgttgaccatagcttcagagcaccatgggcagcctgtgtggctcacccagacc
caagagtatgccaacaaagttctgctctgcctcttcactgtggagatgcttctcaaacta
tacggcctgggcccctctgtctacgttgcctcctttttcaatcgctttgactgcttcgtg
gtctgtgggggcatcctagaaaccactttggtggaggtgggggccatgcagcctcttggc
atctcagtactccgatgtgtacgcctcctcaggatcttcaaggtcaccaggcactgggca
tccctgagcaatctggtggcatccttgctcaattccatgaagtccatcgcctccttgctg
cttctcctctttctctttatcatcatcttctccctgcttggcatgcagctgtttgggggc
aagttcaactttgaccagacccacaccaagaggagcacctttgataccttcccccaagcc
ctcctcactgtctttcagatcctgactggtgaggattggaacgttgtcatgtatgatggt
atcatggcctacggtgggcccttcttcccagggatgctggtgtgtgtttatttcatcatc
ctcttcatctgtggcaactacatcctgctgaacgtgtttcttgccattgctgtggataac
ctagccagcggagatgcaggcactgccaaagacaagggcagagagaagagcagtgaagga
aaccctccgaaggagaacaaagtattggtgcctggtggagagaatgaggacgcaaaggac
acaagtgaaggagcagcaccaggcatggaggaggaggaagaagaagaggaggaggaggaa
gaggaaaatggtgcaggacatgtggaactcttgcaggaagtggtacccaaggagaaggtg
gtacccatccctgaaggcagtgccttcttctgccttagccaaaccaacccgcttcggaag
gcctgccacacactcatacatcaccatatcttcaccagtctcatcctagtgttcatcatc
ctcagtagtgtgtccctggctgctgaggaccccatccgagctcactccttccgaaaccat
attctgggatattttgattatgccttcacctccatattcactgtggagattctactaaag
atgacagtgtttggggccttcctacaccgaggctctttctgccgtagctggttcaatctg
ttggatctgcttgtggtcagtgtgtccctcatctccttcggcatccactccagtgccatc
tcagttgtgaagattctccgagtcctccgagtcctgaggcctctccgagccatcaacaga
gccaagggacttaagcatgtggtgcagtgtgtgttcgtggccatccggaccatcggaaac
atcatgattgtcaccaccctcttgcagttcatgttcgcctgcattggtgttcagctgttc
aagggaaaattctacagttgcactgatgaggccaaacacaccctgaaagaatgcaagggc
tccttcctcatctaccctgatggagatgtgtcacgacctttggtccgggagcggctctgg
gtcaacagtgattttaactttgacaacgtcctttcagccatgatggccctgttcactgtc
tctacctttgaaggctggcctgcgctactatacaaggccatagatgcaaatgcagaagat
gagggccctatctacaattaccatgtggagatatcagtattcttcattgtctacatcatt
atcatcgccttcttcatgatgaacatctttgtgggctttgttatcatcacgttccgtgcc
cagggagagcaggagtaccaaaactgtgaactggacaagaaccagcgccagtgtgtggaa
tatgccctcaaagctcagccactccgccgatacatccctaaaaatcctcatcagtaccgc
gtgtgggccactgtgaactctgctgcctttgagtacctcatgtttctgctcatcctgctc
aacacggttgccctagccatgcagcactatgaacagactgctccctttaattatgccatg
gacatcctcaacatggtcttcaccggcctcttcaccattgagatggtgctcaaaatcatc
gcctttaaacccaagcattactttgcggatgcctggaatacatttgatgctctcattgta
gtgggcagtgtagtcgacatcgccgtcacagaagtcaataacggaggccatcttggcgag
agttcagaggacagctcccgcatatctatcacgttctttcgcctcttccgagtcatgagg
ctggtcaagcttctgagtaagggtgaggggatccgcacactgctctggacattcatcaag
tctttccaggccttgccctatgtggcacttctcatagcaatgatattcttcatctatgca
gtcattggcatgcagatgtttggcaaggtggctcttcaggacggcacgcagataaatcga
aacaacaatttccagacttttccgcaggctgtgctgcttctgttcaggtgtgccactggt
gaggcctggcaagagataatgctagccagccttccaggaaatcgatgtgaccctgagtct
gactttggcccaggcgaggaatttacctgtggtagcagttttgccatcgtctactttatc
agcttctttatgctctgtgccttcctgattataaatctctttgtggctgtaatcatggat
aactttgattacctaaccagagattggtctatcctgggaccccaccaccttgatgaattc
aagaggatctggtctgaatatgaccccggagccaagggccgcatcaagcacttggatgtg
gttgccctgctgagacgcatccagcccccattgggatttggaaaactatgcccacaccga
gtggcctgcaagagactcgtggcaatgaatgtgcccctcaactcagatggaacagtgaca
ttcaacgctacactctttgccctggtgcggacatccctgaagatcaagacagaagggaac
ctggatcaagccaaccaggagcttcggatggtcatcaaaaagatctggaagcggataaag
cagaaattgttggatgaggtcatccctcctcccgatgaggaagaggtcactgtgggaaaa
ttctatgccacattcctgatccaagattatttccgaaaattccggagaaggaaagaaaag
gggctactaggaagagaggccccaacaagcacatcctctgccctccaggctggtctaagg
agcctacaggacctgggtcctgagatacgtcaggccctcacctatgacactgaggaagaa
gaggaagaggaagaggcagtgggtcaggaggctgaggaagaggaagctgagaacaaccca
gaaccatacaaagactccatagactcccagccccaatctcgatggaactctaggatttcg
gtgtctctacctgttaaggagaaacttccagattctctctcaactgggccgagtgatgat
gatggactggctcccaactccaggcagcccagtgtgatacaggctggctcccaaccccac
aggagaagctctggggttttcatgttcactatcccggaagaaggaagtattcagcccaag
ggaactcaagggcaggacaatccgaatgaggaacaggaagtccctgactggactcctgac
ctggatgagcaggctgggactccctcaaacccagtccttttaccacctcactggtcccag
caacatgtaaacgggcaccatgtgccacgccgacgtttgctgccccccacgcctgcaggt
cggaagccctccttcaccatccagtgtctgcaacgccagggcagttgtgaagatttaccc
atcccaggcacctaccatcgtggacggacctcaggaccaagcagggctcagggttcctgg
gcagcccctcctcagaagggtcgactgctatatgcccccctgttgttggtggaggaatct
acagtgggtgaaggataccttggcaaacttggcggcccactgcgtaccttcacctgtctg
caagtgcctggagctcattcgaatcccagccaccgcaagaggggcagtgctgacagtttg
gtggaggctgtgctcatctccgaaggcctaggtctctttgcccaagacccacgatttgtg
gccctggccaagcaggagattgcagatgcatgtcacctgaccctggatgagatggacagt
gctgccagtgacctgctggcacagagagccacctccctttacagtgatgaggagtctatt
ctctcccgctttgatgaagaagacctgggagatgagatggcctgtgtccatgccctctaa
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integrated database retrieval system
